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Database: UniProt/TrEMBL
Entry: I4CT52_PSEST
LinkDB: I4CT52_PSEST
Original site: I4CT52_PSEST 
ID   I4CT52_PSEST            Unreviewed;       854 AA.
AC   I4CT52;
DT   05-SEP-2012, integrated into UniProtKB/TrEMBL.
DT   05-SEP-2012, sequence version 1.
DT   07-JUN-2017, entry version 33.
DE   SubName: Full=ATP-dependent DNA ligase {ECO:0000313|EMBL:AFM33259.1};
DE            EC=6.5.1.1 {ECO:0000313|EMBL:AFM33259.1};
GN   Name=ligD {ECO:0000313|EMBL:AFM33259.1};
GN   ORFNames=A458_10100 {ECO:0000313|EMBL:AFM33259.1};
OS   Pseudomonas stutzeri CCUG 29243.
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales;
OC   Pseudomonadaceae; Pseudomonas.
OX   NCBI_TaxID=1196835 {ECO:0000313|EMBL:AFM33259.1, ECO:0000313|Proteomes:UP000006063};
RN   [1] {ECO:0000313|EMBL:AFM33259.1, ECO:0000313|Proteomes:UP000006063}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=CCUG 29243 {ECO:0000313|EMBL:AFM33259.1};
RX   PubMed=23144395; DOI=10.1128/JB.01753-12;
RA   Brunet-Galmes I., Busquets A., Pena A., Gomila M., Nogales B.,
RA   Garcia-Valdes E., Lalucat J., Bennasar A., Bosch R.;
RT   "Complete Genome Sequence of the Naphthalene-Degrading Bacterium
RT   Pseudomonas stutzeri AN10 (CCUG 29243).";
RL   J. Bacteriol. 194:6642-6643(2012).
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DR   EMBL; CP003677; AFM33259.1; -; Genomic_DNA.
DR   RefSeq; WP_014820221.1; NC_018028.1.
DR   EnsemblBacteria; AFM33259; AFM33259; A458_10100.
DR   KEGG; psc:A458_10100; -.
DR   PATRIC; fig|1196835.3.peg.2029; -.
DR   KO; K01971; -.
DR   OrthoDB; POG091H0AZ9; -.
DR   Proteomes; UP000006063; Chromosome.
DR   GO; GO:0005524; F:ATP binding; IEA:InterPro.
DR   GO; GO:0003910; F:DNA ligase (ATP) activity; IEA:UniProtKB-EC.
DR   GO; GO:0006310; P:DNA recombination; IEA:InterPro.
DR   GO; GO:0006281; P:DNA repair; IEA:InterPro.
DR   CDD; cd04862; PaeLigD_Pol_like; 1.
DR   InterPro; IPR012309; DNA_ligase_ATP-dep_C.
DR   InterPro; IPR012310; DNA_ligase_ATP-dep_cent.
DR   InterPro; IPR014146; LigD_ligase_dom.
DR   InterPro; IPR014144; LigD_PE_domain.
DR   InterPro; IPR014145; LigD_pol_dom.
DR   InterPro; IPR012340; NA-bd_OB-fold.
DR   InterPro; IPR014143; NHEJ_ligase_prk.
DR   InterPro; IPR033651; PaeLigD_Pol-like.
DR   Pfam; PF04679; DNA_ligase_A_C; 1.
DR   Pfam; PF01068; DNA_ligase_A_M; 1.
DR   Pfam; PF13298; LigD_N; 1.
DR   SUPFAM; SSF50249; SSF50249; 1.
DR   TIGRFAMs; TIGR02777; LigD_PE_dom; 1.
DR   TIGRFAMs; TIGR02778; ligD_pol; 1.
DR   TIGRFAMs; TIGR02779; NHEJ_ligase_lig; 1.
DR   TIGRFAMs; TIGR02776; NHEJ_ligase_prk; 1.
DR   PROSITE; PS50160; DNA_LIGASE_A3; 1.
PE   4: Predicted;
KW   Complete proteome {ECO:0000313|Proteomes:UP000006063};
KW   Ligase {ECO:0000313|EMBL:AFM33259.1}.
FT   DOMAIN      324    416       DNA_LIGASE_A3. {ECO:0000259|PROSITE:
FT                                PS50160}.
SQ   SEQUENCE   854 AA;  94282 MW;  955E0EF9430866FF CRC64;
     MALDEYQRMR DFAATPEPSG KARGRSRKVQ SLQYCIQKHD ATRLHYDFRL ELDGTLKSWA
     IPKGPSLDPS VRRLAVHVED HPLEYATFEG SIPAGHYGAG DVIVWDRGVW IPQGDPQEGY
     RKGKLKFSLE GEKLAGSWNL VRTHMAGKKE QWFLIKSHDE AAREEGEYDV VTAEPNSVLS
     DRTLVPRKRG AAKARVAEAP AKPVKAPARK RASRKKSDAV KLEGAVPAKL PETFKPQLAT
     LVDAVPSGDW RYEIKFDGYR MLARIDAGKV ALFTRNGHDW TAKMPQQAAA LAGLGLESGW
     LDGEVVVPNE EGAPDFQALQ NAFEAGRSGS ILYYLFDVPY LNGMDLRDVP LEQRRAALRE
     VLEGSDSELL RFSDDFTEQP DSILESACQM KLEGLIGKRA GSSYTSRRSS SWVKIKCSNR
     QEFIIVGYTE PKGTRTGFGA LLLGLHDDSG KLLYAGKVGT GFNQATLKSL HKQLKKLEAD
     KSPLAKAAPA ADVRGAQWLK PELMCEAAYA EMTRQGVVRH SVFHGLRSDK PADAITRERA
     KPASRSSKAE QRQTDPIGSG RIKISSPERI IDPSSGITKI EVARFYAQIA PWALPQLRAR
     PLALVRAPEG ITGELFFQKH ADKLAIPHIT QLDPALDPKH GALLVIDSAE ALVGAAQMGT
     IELHCWNAVA PELEHPDRFV LDLDPDPALP WKSMLEATQL TQTLLDEIGL TSFLKTSGGK
     GIHIVVPLDP VHGWSEVKAF SQAIAKYLAK LLPSHFSAVS GPKNRVGRIF IDYLRNSRGA
     STVAPYSVRA REGLPVSVPI HREELADLKG ANLWTVRNLL ERLQELGDDD PWADMTRVRQ
     TITAQMRERL AMPA
//
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