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Database: UniProt/TrEMBL
Entry: L0FHZ0_PSEPU
LinkDB: L0FHZ0_PSEPU
Original site: L0FHZ0_PSEPU 
ID   L0FHZ0_PSEPU            Unreviewed;       830 AA.
AC   L0FHZ0;
DT   06-MAR-2013, integrated into UniProtKB/TrEMBL.
DT   06-MAR-2013, sequence version 1.
DT   07-JUN-2017, entry version 24.
DE   SubName: Full=LigD protein {ECO:0000313|EMBL:AGA73544.1};
DE            EC=6.5.1.1 {ECO:0000313|EMBL:AGA73544.1};
GN   Name=ligD {ECO:0000313|EMBL:AGA73544.1};
GN   ORFNames=B479_13240 {ECO:0000313|EMBL:AGA73544.1};
OS   Pseudomonas putida HB3267.
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales;
OC   Pseudomonadaceae; Pseudomonas.
OX   NCBI_TaxID=1215088 {ECO:0000313|EMBL:AGA73544.1, ECO:0000313|Proteomes:UP000010800};
RN   [1] {ECO:0000313|EMBL:AGA73544.1, ECO:0000313|Proteomes:UP000010800}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=PC9 {ECO:0000313|EMBL:AGA73544.1};
RX   PubMed=24465371;
RA   Molina L., Udaondo Z., Duque E., Fernandez M., Molina-Santiago C.,
RA   Roca A., Porcel M., de la Torre J., Segura A., Plesiat P., Jeannot K.,
RA   Ramos J.L.;
RT   "Antibiotic Resistance Determinants in a Pseudomonas putida Strain
RT   Isolated from a Hospital.";
RL   PLoS ONE 9:E81604-E81604(2014).
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DR   EMBL; CP003738; AGA73544.1; -; Genomic_DNA.
DR   RefSeq; WP_015270342.1; NC_019905.1.
DR   EnsemblBacteria; AGA73544; AGA73544; B479_13240.
DR   KEGG; ppuh:B479_13240; -.
DR   PATRIC; fig|1215088.3.peg.2663; -.
DR   KO; K01971; -.
DR   Proteomes; UP000010800; Chromosome.
DR   GO; GO:0005524; F:ATP binding; IEA:InterPro.
DR   GO; GO:0003910; F:DNA ligase (ATP) activity; IEA:UniProtKB-EC.
DR   GO; GO:0006310; P:DNA recombination; IEA:InterPro.
DR   GO; GO:0006281; P:DNA repair; IEA:InterPro.
DR   CDD; cd04862; PaeLigD_Pol_like; 1.
DR   InterPro; IPR012309; DNA_ligase_ATP-dep_C.
DR   InterPro; IPR012310; DNA_ligase_ATP-dep_cent.
DR   InterPro; IPR014146; LigD_ligase_dom.
DR   InterPro; IPR014144; LigD_PE_domain.
DR   InterPro; IPR014145; LigD_pol_dom.
DR   InterPro; IPR012340; NA-bd_OB-fold.
DR   InterPro; IPR014143; NHEJ_ligase_prk.
DR   InterPro; IPR033651; PaeLigD_Pol-like.
DR   Pfam; PF04679; DNA_ligase_A_C; 1.
DR   Pfam; PF01068; DNA_ligase_A_M; 1.
DR   Pfam; PF13298; LigD_N; 1.
DR   SUPFAM; SSF50249; SSF50249; 1.
DR   TIGRFAMs; TIGR02777; LigD_PE_dom; 1.
DR   TIGRFAMs; TIGR02778; ligD_pol; 1.
DR   TIGRFAMs; TIGR02779; NHEJ_ligase_lig; 1.
DR   TIGRFAMs; TIGR02776; NHEJ_ligase_prk; 1.
DR   PROSITE; PS50160; DNA_LIGASE_A3; 1.
PE   4: Predicted;
KW   Complete proteome {ECO:0000313|Proteomes:UP000010800};
KW   Ligase {ECO:0000313|EMBL:AGA73544.1}.
FT   DOMAIN      305    397       DNA_LIGASE_A3. {ECO:0000259|PROSITE:
FT                                PS50160}.
SQ   SEQUENCE   830 AA;  92437 MW;  E05CF165141F0FBD CRC64;
     MAKPLQEYAR KRDFNATPEP SGKRSRGKRA HALQFCIQKH DASHLHYDFR LELDGTLKSW
     AIPKGPSLDP KVRRLAVHVE DHPLDYADFE GHIPEGHYGA GDVIVWDRGI WEPEGDAHEA
     YAKGKLRFRL QGEKLGGVWN LFRTHLAGKK EQWMLVKSHD GQARSEAEYS IVDAQPDSVL
     SDRTLVPRKP TAKKAAAPRR KAASKGRKVP LPAQLQPQLA TLVDSPPSGD WRYEVKFDGY
     RILARIDGDD VRLFTRNGHD WSGKMPRQVA ALRALGLDSA WLDGEVVVAG ENGAADFQAL
     QNAFDTEHDE HITYYLFDLP FLGGQDLRQL PLQDRRDTLQ RLLEHNESDV LKYSADFDQP
     VESLLDSACR LQLEGLIGKR VDSPYSGRRS PDWIKLKCKQ RQEFVIVGYT DPKGSRSGFG
     ALLLALHDND SGELRYAGKV GTGFSATTLA SIHARLKPLE TAEPALPNPP TGAEARGVHW
     LKPQLLAEVA YAQMTRDGIV RHSVFHGLRD DKPATAIDLE RSMPAKTLPK RKQAKAPEAL
     GELRLTHPER VVDATSGVTK REVAEYYAAV SQWILPQLKN RPVALVRAPD GLAGELFFQK
     NAGQLHLPNV LSYDKAEAGQ AAMVINRADT LIGAVQMNML ELHTWNATDK DFDKPDRFVL
     DLDPDPALPW KAMLEATQLA LTLLAELGLK VFLKTSGGKG MHLVVPLTRR ASWDEVKAFS
     HGIVDYLARL FPDRLSAVSG PKNRIGRIFI DYLRNGKGAT TACAYTLRAR EGLPVSVPIW
     REELPQLKGA NQWNIGNVLE RLGDVDDPWA DYGKTRQSIT VGMRKQLGLA
//
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