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Database: UniProt/TrEMBL
Entry: L0GIZ3_PSEST
LinkDB: L0GIZ3_PSEST
Original site: L0GIZ3_PSEST 
ID   L0GIZ3_PSEST            Unreviewed;       854 AA.
AC   L0GIZ3;
DT   06-MAR-2013, integrated into UniProtKB/TrEMBL.
DT   06-MAR-2013, sequence version 1.
DT   07-JUN-2017, entry version 25.
DE   SubName: Full=ATP-dependent DNA ligase LigD polymerase module {ECO:0000313|EMBL:AGA86713.1};
GN   ORFNames=Psest_2179 {ECO:0000313|EMBL:AGA86713.1};
OS   Pseudomonas stutzeri RCH2.
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales;
OC   Pseudomonadaceae; Pseudomonas.
OX   NCBI_TaxID=644801 {ECO:0000313|EMBL:AGA86713.1, ECO:0000313|Proteomes:UP000010820};
RN   [1] {ECO:0000313|EMBL:AGA86713.1, ECO:0000313|Proteomes:UP000010820}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=RCH2 {ECO:0000313|EMBL:AGA86713.1,
RC   ECO:0000313|Proteomes:UP000010820};
RG   US DOE Joint Genome Institute;
RA   Lucas S., Han J., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S.,
RA   Peters L., Ovchinnikova G., Zeytun A., Lu M., Detter J.C., Han C.,
RA   Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Pagani I.,
RA   Chakraborty R., Arkin A., Dehal P., Wall J., Hazen T., Woyke T.;
RT   "Complete sequence of chromosome of Pseudomonas stutzeri RCH2.";
RL   Submitted (OCT-2011) to the EMBL/GenBank/DDBJ databases.
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DR   EMBL; CP003071; AGA86713.1; -; Genomic_DNA.
DR   RefSeq; WP_015276997.1; NC_019936.1.
DR   EnsemblBacteria; AGA86713; AGA86713; Psest_2179.
DR   KEGG; psh:Psest_2179; -.
DR   PATRIC; fig|644801.3.peg.2131; -.
DR   KO; K01971; -.
DR   OrthoDB; POG091H0AZ9; -.
DR   BioCyc; PSTU644801:G13C5-2144-MONOMER; -.
DR   Proteomes; UP000010820; Chromosome.
DR   GO; GO:0005524; F:ATP binding; IEA:InterPro.
DR   GO; GO:0003910; F:DNA ligase (ATP) activity; IEA:InterPro.
DR   GO; GO:0006310; P:DNA recombination; IEA:InterPro.
DR   GO; GO:0006281; P:DNA repair; IEA:InterPro.
DR   CDD; cd04862; PaeLigD_Pol_like; 1.
DR   InterPro; IPR012309; DNA_ligase_ATP-dep_C.
DR   InterPro; IPR012310; DNA_ligase_ATP-dep_cent.
DR   InterPro; IPR014146; LigD_ligase_dom.
DR   InterPro; IPR014144; LigD_PE_domain.
DR   InterPro; IPR014145; LigD_pol_dom.
DR   InterPro; IPR012340; NA-bd_OB-fold.
DR   InterPro; IPR014143; NHEJ_ligase_prk.
DR   InterPro; IPR033651; PaeLigD_Pol-like.
DR   Pfam; PF04679; DNA_ligase_A_C; 1.
DR   Pfam; PF01068; DNA_ligase_A_M; 1.
DR   Pfam; PF13298; LigD_N; 1.
DR   SUPFAM; SSF50249; SSF50249; 1.
DR   TIGRFAMs; TIGR02777; LigD_PE_dom; 1.
DR   TIGRFAMs; TIGR02778; ligD_pol; 1.
DR   TIGRFAMs; TIGR02779; NHEJ_ligase_lig; 1.
DR   TIGRFAMs; TIGR02776; NHEJ_ligase_prk; 1.
DR   PROSITE; PS50160; DNA_LIGASE_A3; 1.
PE   4: Predicted;
KW   Complete proteome {ECO:0000313|Proteomes:UP000010820};
KW   Ligase {ECO:0000313|EMBL:AGA86713.1}.
FT   DOMAIN      323    415       DNA_LIGASE_A3. {ECO:0000259|PROSITE:
FT                                PS50160}.
SQ   SEQUENCE   854 AA;  94814 MW;  C0EEF76AA784032E CRC64;
     MALEDYQRMR DFAATPEPAG KARPKSRKTQ ALQYCIQKHD ATRLHYDFRL ELDGTLKSWA
     IPKGPSLDPS VRRLAVHVED HPLEYATFEG SIPAGHYGAG DVIVWDRGVW IPEGDPRDAY
     RKGKLKFALE GEKLAGSWNL VRTQMDGKKE QWFLIKSRDE AARDESDYDI VAAEPDSVLS
     DRTLVPRKRG AKARVAESPP SPVKAPAKQR APRKQKEKVA LDGALPAKLP ESFKPQLATL
     VDSVPAGDWR YEIKFDGYRM LARIDAGEVR LFTRNGHDWT AKMPQQAAAL AGLGLESGWL
     DGEVVVPNEE GTPDFQALQN AFEAGRSGNI LYYLFDIPYL NGMDLRDVPL EQRRAALREV
     LERSDSELLR FSEDFTEQPD SILESACQMK LEGLIGKRAG STYTSKRSSS WVKIKCSNRQ
     EFIIVGYTQP KGTRTGFGAL LLGLHDEKGK LLYAGKVGTG FNQATLQGLH KQLKKLETDK
     SPLDKAAPAA DVRGAQWLKP ELMCEVAYAE MTRQGVVRHS VFHGLRSDKP AEAITHERAK
     PVASQTKASA ARQPDSIGSA RIKISNPERV IDPSSGISKI ELARFYAQIA PWALPQLQNR
     PLALVRAPEG ITGELFFQKH ADKLAIPHIT QLDPALDPKH GALLVIDSVE ALVGAAQMGT
     IELHSWNAVA PDLEHPDRFV LDLDPDPALP WKRMLEATQL TQTLLDEIGL ASFLKTSGGK
     GLHIVVPLDS VHDWTEVKSF SQAIARYLAK LLPSHFSAVS GPKNRVGRIF IDYLRNSRGA
     STVAPYSVRA REGLPVSVPI HREELADLKG ANLWTVRNLL ERLQELGDDD PWANIGTTRQ
     RLTKQMRERL GVKD
//
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