ID M1CIX4_SOLTU Unreviewed; 1064 AA.
AC M1CIX4;
DT 03-APR-2013, integrated into UniProtKB/TrEMBL.
DT 03-APR-2013, sequence version 1.
DT 24-JAN-2024, entry version 63.
DE SubName: Full=SET domain protein {ECO:0000313|EnsemblPlants:PGSC0003DMT400068351};
GN Name=102599225 {ECO:0000313|EnsemblPlants:PGSC0003DMT400068351};
OS Solanum tuberosum (Potato).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum.
OX NCBI_TaxID=4113 {ECO:0000313|EnsemblPlants:PGSC0003DMT400068351, ECO:0000313|Proteomes:UP000011115};
RN [1] {ECO:0000313|Proteomes:UP000011115}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. DM1-3 516 R44 {ECO:0000313|Proteomes:UP000011115};
RX PubMed=21743474; DOI=10.1038/nature10158;
RG The Potato Genome Sequencing Consortium;
RT "Genome sequence and analysis of the tuber crop potato.";
RL Nature 475:189-195(2011).
RN [2] {ECO:0000313|EnsemblPlants:PGSC0003DMT400068351}
RP IDENTIFICATION.
RC STRAIN=DM1-3 516 R44 {ECO:0000313|EnsemblPlants:PGSC0003DMT400068351};
RG EnsemblPlants;
RL Submitted (JUN-2015) to UniProtKB.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|PROSITE-ProRule:PRU00358}.
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DR RefSeq; XP_006361159.1; XM_006361097.2.
DR AlphaFoldDB; M1CIX4; -.
DR STRING; 4113.M1CIX4; -.
DR PaxDb; 4113-PGSC0003DMT400068351; -.
DR EnsemblPlants; PGSC0003DMT400068351; PGSC0003DMT400068351; PGSC0003DMG400026579.
DR GeneID; 102599225; -.
DR Gramene; PGSC0003DMT400068351; PGSC0003DMT400068351; PGSC0003DMG400026579.
DR KEGG; sot:102599225; -.
DR eggNOG; KOG1082; Eukaryota.
DR HOGENOM; CLU_004556_0_0_1; -.
DR InParanoid; M1CIX4; -.
DR OMA; LENGCHS; -.
DR OrthoDB; 5481936at2759; -.
DR Proteomes; UP000011115; Unassembled WGS sequence.
DR ExpressionAtlas; M1CIX4; baseline.
DR GO; GO:0005694; C:chromosome; IEA:UniProtKB-KW.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003690; F:double-stranded DNA binding; IBA:GO_Central.
DR GO; GO:0042054; F:histone methyltransferase activity; IBA:GO_Central.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR Gene3D; 2.170.270.10; SET domain; 1.
DR Gene3D; 2.30.280.10; SRA-YDG; 1.
DR InterPro; IPR025794; H3-K9-MeTrfase_plant.
DR InterPro; IPR003616; Post-SET_dom.
DR InterPro; IPR007728; Pre-SET_dom.
DR InterPro; IPR015947; PUA-like_sf.
DR InterPro; IPR001214; SET_dom.
DR InterPro; IPR046341; SET_dom_sf.
DR InterPro; IPR036987; SRA-YDG_sf.
DR InterPro; IPR003105; SRA_YDG.
DR PANTHER; PTHR45660; HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR; 1.
DR PANTHER; PTHR45660:SF60; HISTONE-LYSINE N-METHYLTRANSFERASE, H3 LYSINE-9 SPECIFIC SUVH6-LIKE ISOFORM X1; 1.
DR Pfam; PF05033; Pre-SET; 1.
DR Pfam; PF02182; SAD_SRA; 1.
DR Pfam; PF00856; SET; 1.
DR SMART; SM00468; PreSET; 1.
DR SMART; SM00317; SET; 1.
DR SMART; SM00466; SRA; 1.
DR SUPFAM; SSF88697; PUA domain-like; 1.
DR SUPFAM; SSF82199; SET domain; 1.
DR PROSITE; PS50868; POST_SET; 1.
DR PROSITE; PS50867; PRE_SET; 1.
DR PROSITE; PS51575; SAM_MT43_SUVAR39_2; 1.
DR PROSITE; PS50280; SET; 1.
DR PROSITE; PS51015; YDG; 1.
PE 4: Predicted;
KW Chromosome {ECO:0000256|ARBA:ARBA00022454};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242, ECO:0000256|PROSITE-
KW ProRule:PRU00358}; Reference proteome {ECO:0000313|Proteomes:UP000011115};
KW S-adenosyl-L-methionine {ECO:0000256|ARBA:ARBA00022691};
KW Transferase {ECO:0000256|ARBA:ARBA00022679}.
FT DOMAIN 614..766
FT /note="YDG"
FT /evidence="ECO:0000259|PROSITE:PS51015"
FT DOMAIN 836..896
FT /note="Pre-SET"
FT /evidence="ECO:0000259|PROSITE:PS50867"
FT DOMAIN 899..1034
FT /note="SET"
FT /evidence="ECO:0000259|PROSITE:PS50280"
FT DOMAIN 1048..1064
FT /note="Post-SET"
FT /evidence="ECO:0000259|PROSITE:PS50868"
SQ SEQUENCE 1064 AA; 116605 MW; 7070DAA507ECC574 CRC64;
MASVSNDGLS NKSVKKRQLE NGCHSSYLGI MPKYKTRKVS AVRDFPPGCG RTSPKVDLNH
EQNAVVSTKI EDMANVILVD GVKETNIEIK SQSVEGVNCL INLKDQEKVD RLAGEVVATN
MSAIANGVGE KISDEKSIGV ELPKDLKTSE MELSKGTEDI QYDTSVKEVD EQGVPLVENV
GGGHKTPVGE VKMFSPPQLI SVMEHTSSPK NKYRKRRVSA VRDFPPFCGT NAPKPTVQKC
FGVTEESKDV AGFGKAATNN EVIETLRDVT DTGALPEKLI GSEDADSLKE RDVSSPKDRQ
LEQITMVRTE EQEGVQCDYD GRSRVERTVV MPEIMMKKEG DAGVVGKETL VYSENEREKL
TTASSALGSG NEKPITKGAK PYCARKQGKQ KSLDDPVSGN EIVVSQVESH LTKTAVNALG
SGHEIVKPIV QGLMAKPYCP WMQGERTSLD CGNQVEKDDL SGRKKAKAVT RKNNPRGKKK
LATVGEATDG LSSALVVFND EGSGLWATSN DGACSLNREA VHEDSPVRRG QCDFDVTLPP
FGPNSSSHGD SRTKVRETLR LFQGICRKLL QGEESKSKPE EAKSKQGPNR IDLHAAKIIK
EKGKEVNTGQ HILGEVPGVE VGDEFQYRVE LAIVGVHRLY QAGIDYMKQG GMLIAISIVS
SGVYDDGLED ADVLIYSGQG GNVVGKSKTP EDQKLERGNL ALKNSISVKN PVRVIRGSKE
TKTSDSVDGK GKLVTTYVYD GLYTVENYWT EQGTKGKMVF MFKLVRVPGQ PELAWKEVKS
SKKSKVRHGV CVHDITDGKE TFAISAVNTI DGEKPPPFNY IKKIIYPDWF QPCPFKGCDC
VGRCSDSKKC SCAVKNGGEI PYNRNGAIVE VKPLVYECGP HCKCPPSCYN RVSQHGIKVP
LEIFKTNSRG WGVRALTSIP SGTFICEYVG ELLEDKEAEQ RIGSDEYLFD IGQNYSDCSV
NSSRQAELSE VVEEGYTIDA AQYGNIGRFI NHSCSPNLYA QSVLYDHEDK KMPHIMLFAA
DNIPPLAELS YHYNYSVDQV HDSKGNIKVK KCFCGSSECS GRMY
//