GenomeNet

Database: UniProt/TrEMBL
Entry: Q03SA8_LACBA
LinkDB: Q03SA8_LACBA
Original site: Q03SA8_LACBA 
ID   Q03SA8_LACBA            Unreviewed;       240 AA.
AC   Q03SA8;
DT   14-NOV-2006, integrated into UniProtKB/TrEMBL.
DT   14-NOV-2006, sequence version 1.
DT   19-MAR-2014, entry version 59.
DE   RecName: Full=Pseudouridine synthase;
DE            EC=5.4.99.-;
GN   OrderedLocusNames=LVIS_0771;
OS   Lactobacillus brevis (strain ATCC 367 / JCM 1170).
OC   Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae;
OC   Lactobacillus.
OX   NCBI_TaxID=387344;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 367 / JCM 1170;
RX   PubMed=17030793; DOI=10.1073/pnas.0607117103;
RA   Makarova K.S., Slesarev A., Wolf Y.I., Sorokin A., Mirkin B.,
RA   Koonin E.V., Pavlov A., Pavlova N., Karamychev V., Polouchine N.,
RA   Shakhova V., Grigoriev I., Lou Y., Rohksar D., Lucas S., Huang K.,
RA   Goodstein D.M., Hawkins T., Plengvidhya V., Welker D., Hughes J.,
RA   Goh Y., Benson A., Baldwin K., Lee J.-H., Diaz-Muniz I., Dosti B.,
RA   Smeianov V., Wechter W., Barabote R., Lorca G., Altermann E.,
RA   Barrangou R., Ganesan B., Xie Y., Rawsthorne H., Tamir D., Parker C.,
RA   Breidt F., Broadbent J.R., Hutkins R., O'Sullivan D., Steele J.,
RA   Unlu G., Saier M.H. Jr., Klaenhammer T., Richardson P., Kozyavkin S.,
RA   Weimer B.C., Mills D.A.;
RT   "Comparative genomics of the lactic acid bacteria.";
RL   Proc. Natl. Acad. Sci. U.S.A. 103:15611-15616(2006).
CC   -!- SIMILARITY: Belongs to the pseudouridine synthase rsuA family.
CC   -!- SIMILARITY: Contains S4 RNA-binding domain.
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DR   EMBL; CP000416; ABJ63914.1; -; Genomic_DNA.
DR   RefSeq; YP_794945.1; NC_008497.1.
DR   ProteinModelPortal; Q03SA8; -.
DR   STRING; 387344.LVIS_0771; -.
DR   EnsemblBacteria; ABJ63914; ABJ63914; LVIS_0771.
DR   GeneID; 4414389; -.
DR   KEGG; lbr:LVIS_0771; -.
DR   PATRIC; 22200497; VBILacBre134470_0744.
DR   eggNOG; COG1187; -.
DR   HOGENOM; HOG000044954; -.
DR   KO; K06178; -.
DR   OMA; SMEFAPF; -.
DR   OrthoDB; EOG6130DV; -.
DR   BioCyc; LBRE387344:GJ8S-771-MONOMER; -.
DR   GO; GO:0009982; F:pseudouridine synthase activity; IEA:InterPro.
DR   GO; GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
DR   GO; GO:0001522; P:pseudouridine synthesis; IEA:InterPro.
DR   Gene3D; 3.10.290.10; -; 1.
DR   InterPro; IPR020103; PsdUridine_synth_cat_dom.
DR   InterPro; IPR000748; PsdUridine_synth_RsuA/RluB/E/F.
DR   InterPro; IPR018496; PsdUridine_synth_RsuA/RluB_CS.
DR   InterPro; IPR006145; PsdUridine_synth_RsuA/RluD.
DR   InterPro; IPR002942; S4_RNA-bd.
DR   Pfam; PF00849; PseudoU_synth_2; 1.
DR   Pfam; PF01479; S4; 1.
DR   SMART; SM00363; S4; 1.
DR   SUPFAM; SSF55120; SSF55120; 1.
DR   TIGRFAMs; TIGR00093; TIGR00093; 1.
DR   PROSITE; PS01149; PSI_RSU; 1.
DR   PROSITE; PS50889; S4; 1.
PE   3: Inferred from homology;
KW   Complete proteome; Isomerase; RNA-binding.
SQ   SEQUENCE   240 AA;  26390 MW;  2BFB8F04697F9224 CRC64;
     MERLQKVLAH AGVASRRQSE KLIMSGRVKV NGAAVTELGT KVGVHDQILV DGVPISSEAP
     IYIMLYKPRG VVSTANDDKG RKTVVDLVEN VSQRVYPVGR LDYDTSGLLL LTNDGELANR
     LTHPRYEVEK TYIARVTGVP TNDAMKQLRQ GITVDGETYA PAKSKVLSAA DDRKTAIISL
     TIHEGKNHQV KKMLAAVGCP VEKLKREQYG FLTLKGLNAG EARQLKPEEV KELRRLTHLA
//
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