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Database: UniProt/TrEMBL
Entry: Q0HKR0_SHESM
LinkDB: Q0HKR0_SHESM
Original site: Q0HKR0_SHESM 
ID   Q0HKR0_SHESM            Unreviewed;       477 AA.
AC   Q0HKR0;
DT   03-OCT-2006, integrated into UniProtKB/TrEMBL.
DT   03-OCT-2006, sequence version 1.
DT   14-MAY-2014, entry version 65.
DE   SubName: Full=Sigma54 specific transcriptional regulator, Fis family;
GN   OrderedLocusNames=Shewmr4_1278;
OS   Shewanella sp. (strain MR-4).
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales;
OC   Shewanellaceae; Shewanella.
OX   NCBI_TaxID=60480;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=MR-4;
RG   US DOE Joint Genome Institute;
RA   Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C.,
RA   Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H.,
RA   Pitluck S., Kiss H., Brettin T., Bruce D., Han C., Tapia R., Gilna P.,
RA   Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N.,
RA   Mikhailova N., Nealson K., Konstantinidis K., Klappenbach J.,
RA   Tiedje J., Richardson P.;
RT   "Complete sequence of Shewanella sp. MR-4.";
RL   Submitted (AUG-2006) to the EMBL/GenBank/DDBJ databases.
CC   -!- SIMILARITY: Contains 1 sigma-54 factor interaction domain.
CC   -!- SIMILARITY: Contains sigma-54 factor interaction domain.
CC   -!- SIMILARITY: Contains sigma-5factor interaction domain.
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DR   EMBL; CP000446; ABI38357.1; -; Genomic_DNA.
DR   RefSeq; YP_733414.1; NC_008321.1.
DR   ProteinModelPortal; Q0HKR0; -.
DR   STRING; 60480.Shewmr4_1278; -.
DR   EnsemblBacteria; ABI38357; ABI38357; Shewmr4_1278.
DR   GeneID; 4251211; -.
DR   KEGG; she:Shewmr4_1278; -.
DR   PATRIC; 23579106; VBISheSp133532_1327.
DR   eggNOG; COG2204; -.
DR   HOGENOM; HOG000058487; -.
DR   KO; K10941; -.
DR   OMA; LNYPQLT; -.
DR   OrthoDB; EOG6WHNMG; -.
DR   BioCyc; SSP60480:GI2N-1332-MONOMER; -.
DR   GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR   GO; GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
DR   GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR   GO; GO:0006355; P:regulation of transcription, DNA-templated; IEA:UniProtKB-KW.
DR   GO; GO:0006351; P:transcription, DNA-templated; IEA:UniProtKB-KW.
DR   Gene3D; 1.10.10.60; -; 1.
DR   Gene3D; 3.40.50.300; -; 1.
DR   InterPro; IPR003593; AAA+_ATPase.
DR   InterPro; IPR010518; FleQ.
DR   InterPro; IPR009057; Homeodomain-like.
DR   InterPro; IPR002197; HTH_Fis.
DR   InterPro; IPR027417; P-loop_NTPase.
DR   InterPro; IPR002078; Sigma_54_int.
DR   InterPro; IPR025662; Sigma_54_int_dom_ATP-bd_1.
DR   InterPro; IPR025943; Sigma_54_int_dom_ATP-bd_2.
DR   Pfam; PF06490; FleQ; 1.
DR   Pfam; PF02954; HTH_8; 1.
DR   Pfam; PF00158; Sigma54_activat; 1.
DR   PRINTS; PR01590; HTHFIS.
DR   SMART; SM00382; AAA; 1.
DR   SUPFAM; SSF46689; SSF46689; 2.
DR   SUPFAM; SSF52540; SSF52540; 1.
DR   PROSITE; PS00675; SIGMA54_INTERACT_1; 1.
DR   PROSITE; PS00676; SIGMA54_INTERACT_2; 1.
DR   PROSITE; PS50045; SIGMA54_INTERACT_4; 1.
PE   4: Predicted;
KW   ATP-binding; Complete proteome; DNA-binding; Nucleotide-binding;
KW   Transcription; Transcription regulation.
SQ   SEQUENCE   477 AA;  53885 MW;  75491C4637AA6023 CRC64;
     MMQTDQRILL VGTPSERLSR LCCIFEFLGE QIEIISTEKL SSCLQDTRYR ALVLTTDNMS
     VEALKSLANQ YPWQPILLFG NVGDLQVSNV LGQIEEPLNY PQLTELLHFC QVYGQVKRPQ
     VPTSANQTKL FRSLVGRSEG IANVRHLISQ VATSDATVLV LGQSGTGKEV VARNIHYLSE
     RRDGPFIPVN CGAIPPELLE SELFGHEKGS FTGAISSRKG RFELAEGGTL FLDEIGDMPL
     QMQVKLLRVL QERVFERVGG TKTINADVRV VAATHRDLES MITSNEFRED LYYRLNVFPI
     EMPALSDRKD DVPLLLQELV SRVYNEGRGK VRFTQRAIES LKEHAWSGNV RELSNLVERL
     TILYPGGLVD VNDLPIKYRH IDVPEYSIEL SEEQQERDAL ASIFTSEEPV EIPETRFPSE
     LPPEGVNLKD LLAELEIDMI RQALEQQDNV VARAAEMLGI RRTTLVEKMR KYGMTKE
//
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