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Database: UniProt/TrEMBL
Entry: Q11R79_CYTH3
LinkDB: Q11R79_CYTH3
Original site: Q11R79_CYTH3 
ID   Q11R79_CYTH3            Unreviewed;       896 AA.
AC   Q11R79;
DT   22-AUG-2006, integrated into UniProtKB/TrEMBL.
DT   22-AUG-2006, sequence version 1.
DT   07-JUN-2017, entry version 72.
DE   SubName: Full=ATP-dependent DNA ligase LigD phosphoesterase module / ATP-dependent DNA ligase LigD polymerase module {ECO:0000313|EMBL:ABG60085.1};
DE            EC=6.5.1.1 {ECO:0000313|EMBL:ABG60085.1};
GN   OrderedLocusNames=CHU_2837 {ECO:0000313|EMBL:ABG60085.1};
OS   Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469).
OC   Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae;
OC   Cytophaga.
OX   NCBI_TaxID=269798 {ECO:0000313|EMBL:ABG60085.1, ECO:0000313|Proteomes:UP000001822};
RN   [1] {ECO:0000313|EMBL:ABG60085.1, ECO:0000313|Proteomes:UP000001822}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 33406 / NCIMB 9469 {ECO:0000313|Proteomes:UP000001822};
RX   PubMed=17400776; DOI=10.1128/AEM.00225-07;
RA   Xie G., Bruce D.C., Challacombe J.F., Chertkov O., Detter J.C.,
RA   Gilna P., Han C.S., Lucas S., Misra M., Myers G.L., Richardson P.,
RA   Tapia R., Thayer N., Thompson L.S., Brettin T.S., Henrissat B.,
RA   Wilson D.B., McBride M.J.;
RT   "Genome sequence of the cellulolytic gliding bacterium Cytophaga
RT   hutchinsonii.";
RL   Appl. Environ. Microbiol. 73:3536-3546(2007).
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DR   EMBL; CP000383; ABG60085.1; -; Genomic_DNA.
DR   RefSeq; WP_011586195.1; NZ_FPJX01000002.1.
DR   STRING; 269798.CHU_2837; -.
DR   EnsemblBacteria; ABG60085; ABG60085; CHU_2837.
DR   KEGG; chu:CHU_2837; -.
DR   eggNOG; ENOG4105DQE; Bacteria.
DR   eggNOG; COG1793; LUCA.
DR   eggNOG; COG3285; LUCA.
DR   HOGENOM; HOG000222509; -.
DR   KO; K01971; -.
DR   OMA; AMMVEDH; -.
DR   OrthoDB; POG091H0AZ9; -.
DR   Proteomes; UP000001822; Chromosome.
DR   GO; GO:0005524; F:ATP binding; IEA:InterPro.
DR   GO; GO:0003910; F:DNA ligase (ATP) activity; IEA:UniProtKB-EC.
DR   GO; GO:0006310; P:DNA recombination; IEA:InterPro.
DR   GO; GO:0006281; P:DNA repair; IEA:InterPro.
DR   InterPro; IPR012309; DNA_ligase_ATP-dep_C.
DR   InterPro; IPR012310; DNA_ligase_ATP-dep_cent.
DR   InterPro; IPR014146; LigD_ligase_dom.
DR   InterPro; IPR014144; LigD_PE_domain.
DR   InterPro; IPR014145; LigD_pol_dom.
DR   InterPro; IPR012340; NA-bd_OB-fold.
DR   InterPro; IPR014143; NHEJ_ligase_prk.
DR   Pfam; PF04679; DNA_ligase_A_C; 1.
DR   Pfam; PF01068; DNA_ligase_A_M; 1.
DR   Pfam; PF13298; LigD_N; 1.
DR   SUPFAM; SSF50249; SSF50249; 1.
DR   TIGRFAMs; TIGR02777; LigD_PE_dom; 1.
DR   TIGRFAMs; TIGR02778; ligD_pol; 1.
DR   TIGRFAMs; TIGR02779; NHEJ_ligase_lig; 1.
DR   TIGRFAMs; TIGR02776; NHEJ_ligase_prk; 1.
DR   PROSITE; PS50160; DNA_LIGASE_A3; 1.
PE   4: Predicted;
KW   Complete proteome {ECO:0000313|Proteomes:UP000001822};
KW   Ligase {ECO:0000313|EMBL:ABG60085.1};
KW   Reference proteome {ECO:0000313|Proteomes:UP000001822}.
SQ   SEQUENCE   896 AA;  100886 MW;  C5891BA8D422C24F CRC64;
     MALETYKEKR NFKHTPEPVA KKNAAGTELK FVIQRHAASH LHYDFRLEME GVLKSWAVPK
     GPSLNPSDKR LAMMVEDHPF AYRTFHGVIP EGNYGAGIVE IWDEGTYHAI GNEDRKTGEK
     ELLADLKKGN LKFVLHGKKL KGEFALVKIK NNNSSKDNAW LLIKHKDAYA TEDAYSSEDY
     VPANSKIVKK TAASKKPATP VSKKSAIKMV DDKPATDKKK VQSAPAQKIK QGKDPMPHEV
     KPMLAKLKDA PFDSPEWIFE IKWDGYRAIA EIDQGKVELY SRNLISFTKK YKPIVESLQS
     FGHNVVLDGE VIVLNADGTS SFQMLQQYDE TPSPDLCYCV FDILFLDGRD LRDLPLLERK
     AILKKVIPDL PNLKYSDHVE KEGIRFFELA KKNKLEGIMA KRADSIYRLG SRSDQWIKLK
     IVKSQEAIIC GFTAPRNSRK DFGALILGAY ENGRLVYIGH TGGGFTMALL ASTLKLMKPL
     IQKESPFDVK IKTNEKVTWI KPKLVCAIAF SEWTSDGHMR QPIFQGMRID KKVSEVTREL
     PTVINVPQDN AMEVTRNIKQ TAAKTSTKKT AHKKAASKKT TTNKKTTDVA AAENSKAGEF
     KIDGQVLKIS NRSKVYWPED GYTKGDLIDY YMQAADYILP YLKDRPESLN RHPNGIDGSS
     FFQKDMGDTL PDWIEAKEIF SESNSKDINY VLCQNKATLI YMANLGCIEI NPWNSRVKKI
     EYPDFIVIDL DPSDNNTFDE VIETALVVKK ILDKGGIDAY CKTSGATGLH IYIPLGAKYT
     YEQGKNFAHI IAQLTNNELP ELTSLVRNPK ERKKQIYVDY LQNRGGQTLA APYSVRPKPG
     ATVSTPLEWK EVKKGLHPST FTIKTIFKRL EKKGDLFKGV LGKGIDMEKC LKKLGA
//
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