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Database: UniProt/TrEMBL
Entry: Q133M6_RHOPS
LinkDB: Q133M6_RHOPS
Original site: Q133M6_RHOPS 
ID   Q133M6_RHOPS            Unreviewed;       930 AA.
AC   Q133M6;
DT   31-OCT-2006, integrated into UniProtKB/TrEMBL.
DT   31-OCT-2006, sequence version 1.
DT   07-JUN-2017, entry version 66.
DE   SubName: Full=ATP dependent DNA ligase {ECO:0000313|EMBL:ABE40713.1};
GN   OrderedLocusNames=RPD_3490 {ECO:0000313|EMBL:ABE40713.1};
OS   Rhodopseudomonas palustris (strain BisB5).
OC   Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales;
OC   Bradyrhizobiaceae; Rhodopseudomonas.
OX   NCBI_TaxID=316057 {ECO:0000313|EMBL:ABE40713.1, ECO:0000313|Proteomes:UP000001818};
RN   [1] {ECO:0000313|EMBL:ABE40713.1, ECO:0000313|Proteomes:UP000001818}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=BisB5 {ECO:0000313|EMBL:ABE40713.1,
RC   ECO:0000313|Proteomes:UP000001818};
RG   US DOE Joint Genome Institute;
RA   Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C.,
RA   Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H.,
RA   Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J.,
RA   Larimer F., Land M., Hauser L., Pelletier D.A., Kyrpides N.,
RA   Lykidis A., Oda Y., Harwood C.S., Richardson P.;
RT   "Complete sequence of Rhodopseudomonas palustris BisB5.";
RL   Submitted (MAR-2006) to the EMBL/GenBank/DDBJ databases.
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DR   EMBL; CP000283; ABE40713.1; -; Genomic_DNA.
DR   ProteinModelPortal; Q133M6; -.
DR   STRING; 316057.RPD_3490; -.
DR   EnsemblBacteria; ABE40713; ABE40713; RPD_3490.
DR   KEGG; rpd:RPD_3490; -.
DR   eggNOG; ENOG4105DQE; Bacteria.
DR   eggNOG; COG1793; LUCA.
DR   eggNOG; COG3285; LUCA.
DR   HOGENOM; HOG000222509; -.
DR   KO; K01971; -.
DR   OMA; AMMVEDH; -.
DR   OrthoDB; POG091H0AZ9; -.
DR   Proteomes; UP000001818; Chromosome.
DR   GO; GO:0005524; F:ATP binding; IEA:InterPro.
DR   GO; GO:0003910; F:DNA ligase (ATP) activity; IEA:InterPro.
DR   GO; GO:0006310; P:DNA recombination; IEA:InterPro.
DR   GO; GO:0006281; P:DNA repair; IEA:InterPro.
DR   CDD; cd04862; PaeLigD_Pol_like; 1.
DR   InterPro; IPR012309; DNA_ligase_ATP-dep_C.
DR   InterPro; IPR012310; DNA_ligase_ATP-dep_cent.
DR   InterPro; IPR014146; LigD_ligase_dom.
DR   InterPro; IPR014144; LigD_PE_domain.
DR   InterPro; IPR014145; LigD_pol_dom.
DR   InterPro; IPR012340; NA-bd_OB-fold.
DR   InterPro; IPR014143; NHEJ_ligase_prk.
DR   InterPro; IPR033651; PaeLigD_Pol-like.
DR   Pfam; PF04679; DNA_ligase_A_C; 1.
DR   Pfam; PF01068; DNA_ligase_A_M; 1.
DR   Pfam; PF13298; LigD_N; 1.
DR   SUPFAM; SSF50249; SSF50249; 1.
DR   TIGRFAMs; TIGR02777; LigD_PE_dom; 1.
DR   TIGRFAMs; TIGR02778; ligD_pol; 1.
DR   TIGRFAMs; TIGR02779; NHEJ_ligase_lig; 1.
DR   TIGRFAMs; TIGR02776; NHEJ_ligase_prk; 1.
DR   PROSITE; PS50160; DNA_LIGASE_A3; 1.
PE   4: Predicted;
KW   Complete proteome {ECO:0000313|Proteomes:UP000001818};
KW   Ligase {ECO:0000313|EMBL:ABE40713.1}.
FT   DOMAIN      381    467       DNA_LIGASE_A3. {ECO:0000259|PROSITE:
FT                                PS50160}.
SQ   SEQUENCE   930 AA;  101391 MW;  EA276BD0346EA711 CRC64;
     MVAGKTLTLY RNKRDFEQTA EPRGDGKVAP SKRRRFVIQK HDATRLHYDL RLEYNGVFKS
     WAVTRGPSLD PHDKRLAVEV EDHPLDYGDF EGTIPKGQYG GGTVQLWDRG YWECDDPERG
     FKKGDLKFSL DGEKLQGSWV LVRMRHDRNG GKRTNWLLIK HRDDDAREGK ANDILDQDRS
     VASGRAMTEI AQGKGRAPKP FMTGKAARVK ADAVWNSKEG LAADERAANG AGGAVASKPA
     PPNKAKATTA KSKTAKSKTA KVAKPKPGRK AAAKRAAMPD FVPPQLCTSV ERPPGGDGWG
     HEIKFDGYRM QLRVDAGEAT LKTRKGLDWT ARFQAIADQA AGLPDALIDT EIVALDQHGH
     PDFAALQAAL SDGDTDNLIC FAFDLLHADG EDLRALPLSD RKRRLQELLT AARGRRKQGL
     IRYVEHFDTG GDAILQSACK LSLEGIVSKK LDAPYRSGRS DNWTKAKCRA GHEVVIGGWK
     TNAGKFRSLL VGVHHDDHLA YVGIVGTGFG QDVVKRLLPE LKAHAAKDNP FAGENAPRKT
     ADVHWLAPEL VAEIEFAGFT GAGMVRQAAF KGLRADKPAG EVEAEEPAKV DIAGPKPGRR
     AKPSSNAKSA KPKTATPNAG RSKTRATHAS RAEVMGVVIS KPDKELWPAS RIGDAVNKRD
     LAHYYEAVGD WMIPHLEGRP CSIVRAPDGI GGEHFFQRHA MPGMSNLIAL AKVAGDRKPY
     VQIDRVEGLI AAAQIGGLEL HPWNCAPGRY EVPGRLVFDL DPAPEVGFDA VIVAAREMKD
     RLEAIGLPSF CKTTGGKGLH VVTPLVPSDD IDWKQAKIFA QTVCAGMADD SPDRYLLNMS
     KQQRKGKIFL DYLRNDRMST AVAVLSPRAR EGATVSMPLT WTQVKAGLDP KRYTVETVPA
     LLAKTKAWAD YDKAAAPLKA AIKKLAFSRA
//
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