ID Q13E70_RHOPS Unreviewed; 258 AA.
AC Q13E70;
DT 31-OCT-2006, integrated into UniProtKB/TrEMBL.
DT 31-OCT-2006, sequence version 1.
DT 01-MAY-2013, entry version 49.
DE SubName: Full=Endonuclease III / DNA-(Apurinic or apyrimidinic site) lyase;
DE EC=3.2.2.-;
DE EC=4.2.99.18;
GN OrderedLocusNames=RPD_0381;
OS Rhodopseudomonas palustris (strain BisB5).
OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales;
OC Bradyrhizobiaceae; Rhodopseudomonas.
OX NCBI_TaxID=316057;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=BisB5;
RG US DOE Joint Genome Institute;
RA Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C.,
RA Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H.,
RA Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J.,
RA Larimer F., Land M., Hauser L., Pelletier D.A., Kyrpides N.,
RA Lykidis A., Oda Y., Harwood C.S., Richardson P.;
RT "Complete sequence of Rhodopseudomonas palustris BisB5.";
RL Submitted (MAR-2006) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; CP000283; ABE37619.1; -; Genomic_DNA.
DR RefSeq; YP_567520.1; NC_007958.1.
DR ProteinModelPortal; Q13E70; -.
DR SMR; Q13E70; 51-256.
DR STRING; 316057.RPD_0381; -.
DR EnsemblBacteria; ABE37619; ABE37619; RPD_0381.
DR GeneID; 4020847; -.
DR KEGG; rpd:RPD_0381; -.
DR PATRIC; 23275609; VBIRhoPal120395_0393.
DR eggNOG; COG0177; -.
DR HOGENOM; HOG000252206; -.
DR KO; K10773; -.
DR OMA; NNKSKHL; -.
DR ProtClustDB; CLSK818236; -.
DR BioCyc; RPAL316057:GHDC-455-MONOMER; -.
DR GO; GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:InterPro.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0003906; F:DNA-(apurinic or apyrimidinic site) lyase activity; IEA:EC.
DR GO; GO:0004519; F:endonuclease activity; IEA:UniProtKB-KW.
DR GO; GO:0016798; F:hydrolase activity, acting on glycosyl bonds; IEA:UniProtKB-KW.
DR GO; GO:0006284; P:base-excision repair; IEA:InterPro.
DR Gene3D; 1.10.1670.10; -; 1.
DR Gene3D; 1.10.340.30; -; 1.
DR InterPro; IPR011257; DNA_glycosylase.
DR InterPro; IPR005759; Endonuclease-III_Nth.
DR InterPro; IPR004035; Endouclease-III_FeS-bd_BS.
DR InterPro; IPR003651; Endouclease3_FeS-loop_motif.
DR InterPro; IPR003265; HhH-GPD_domain.
DR InterPro; IPR000445; HhH_motif.
DR InterPro; IPR023170; HTH_base_excis_C.
DR Pfam; PF10576; EndIII_4Fe-2S; 1.
DR Pfam; PF00633; HHH; 1.
DR Pfam; PF00730; HhH-GPD; 1.
DR PIRSF; PIRSF001435; Nth; 1.
DR SMART; SM00478; ENDO3c; 1.
DR SMART; SM00525; FES; 1.
DR SUPFAM; SSF48150; DNA_glycsylse; 1.
DR TIGRFAMs; TIGR01083; nth; 1.
DR PROSITE; PS00764; ENDONUCLEASE_III_1; 1.
PE 4: Predicted;
KW Complete proteome; Endonuclease; Glycosidase; Hydrolase; Lyase.
SQ SEQUENCE 258 AA; 28409 MW; FBC86B41FFB482B0 CRC64;
MQKITRRAPA PAVAKSAKIP ASSVAAKPRP QRQKSGKAAT KPKRLRRWSP DEVREAFTRF
ARANPEPKGE LEHLNPFTLL VAVVLSAQAT DSGVNKATRA LFAVADTPQK MLALGEERVR
DYIKTIGLFR TKAKNVIALS QKLITDFGGE VPSTRAELET LPGAGRKTAN VVLNMAFGQP
TMAVDTHVFR VGNRTGLAPG DTPLAVELAL ERMIPPEFMQ HAHHWLILHG RYTCLARKPR
CEVCPINDLC RWPEKTVA
//
