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Database: UniProt/TrEMBL
Entry: Q1ITL6_KORVE
LinkDB: Q1ITL6_KORVE
Original site: Q1ITL6_KORVE 
ID   Q1ITL6_KORVE            Unreviewed;       608 AA.
AC   Q1ITL6;
DT   13-JUN-2006, integrated into UniProtKB/TrEMBL.
DT   13-JUN-2006, sequence version 1.
DT   07-JUN-2017, entry version 64.
DE   SubName: Full=ATP dependent DNA ligase {ECO:0000313|EMBL:ABF39784.1};
GN   OrderedLocusNames=Acid345_0779 {ECO:0000313|EMBL:ABF39784.1};
OS   Koribacter versatilis (strain Ellin345).
OC   Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae;
OC   Candidatus Koribacter.
OX   NCBI_TaxID=204669 {ECO:0000313|EMBL:ABF39784.1, ECO:0000313|Proteomes:UP000002432};
RN   [1] {ECO:0000313|EMBL:ABF39784.1, ECO:0000313|Proteomes:UP000002432}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=Ellin345 {ECO:0000313|EMBL:ABF39784.1,
RC   ECO:0000313|Proteomes:UP000002432};
RX   PubMed=19201974; DOI=10.1128/AEM.02294-08;
RA   Ward N.L., Challacombe J.F., Janssen P.H., Henrissat B.,
RA   Coutinho P.M., Wu M., Xie G., Haft D.H., Sait M., Badger J.,
RA   Barabote R.D., Bradley B., Brettin T.S., Brinkac L.M., Bruce D.,
RA   Creasy T., Daugherty S.C., Davidsen T.M., DeBoy R.T., Detter J.C.,
RA   Dodson R.J., Durkin A.S., Ganapathy A., Gwinn-Giglio M., Han C.S.,
RA   Khouri H., Kiss H., Kothari S.P., Madupu R., Nelson K.E., Nelson W.C.,
RA   Paulsen I., Penn K., Ren Q., Rosovitz M.J., Selengut J.D.,
RA   Shrivastava S., Sullivan S.A., Tapia R., Thompson L.S., Watkins K.L.,
RA   Yang Q., Yu C., Zafar N., Zhou L., Kuske C.R.;
RT   "Three genomes from the phylum Acidobacteria provide insight into the
RT   lifestyles of these microorganisms in soils.";
RL   Appl. Environ. Microbiol. 75:2046-2056(2009).
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DR   EMBL; CP000360; ABF39784.1; -; Genomic_DNA.
DR   RefSeq; WP_011521586.1; NC_008009.1.
DR   ProteinModelPortal; Q1ITL6; -.
DR   STRING; 204669.Acid345_0779; -.
DR   EnsemblBacteria; ABF39784; ABF39784; Acid345_0779.
DR   KEGG; aba:Acid345_0779; -.
DR   eggNOG; COG1793; LUCA.
DR   HOGENOM; HOG000222509; -.
DR   KO; K01971; -.
DR   OMA; AAPRTWD; -.
DR   OrthoDB; POG091H0AZ9; -.
DR   Proteomes; UP000002432; Chromosome.
DR   GO; GO:0005524; F:ATP binding; IEA:InterPro.
DR   GO; GO:0003910; F:DNA ligase (ATP) activity; IEA:InterPro.
DR   GO; GO:0006310; P:DNA recombination; IEA:InterPro.
DR   GO; GO:0006281; P:DNA repair; IEA:InterPro.
DR   InterPro; IPR012309; DNA_ligase_ATP-dep_C.
DR   InterPro; IPR012310; DNA_ligase_ATP-dep_cent.
DR   InterPro; IPR014146; LigD_ligase_dom.
DR   InterPro; IPR014144; LigD_PE_domain.
DR   InterPro; IPR012340; NA-bd_OB-fold.
DR   Pfam; PF04679; DNA_ligase_A_C; 1.
DR   Pfam; PF01068; DNA_ligase_A_M; 1.
DR   Pfam; PF13298; LigD_N; 1.
DR   SUPFAM; SSF50249; SSF50249; 1.
DR   TIGRFAMs; TIGR02777; LigD_PE_dom; 1.
DR   TIGRFAMs; TIGR02779; NHEJ_ligase_lig; 1.
DR   PROSITE; PS50160; DNA_LIGASE_A3; 1.
PE   4: Predicted;
KW   Complete proteome {ECO:0000313|Proteomes:UP000002432};
KW   Ligase {ECO:0000313|EMBL:ABF39784.1};
KW   Reference proteome {ECO:0000313|Proteomes:UP000002432}.
FT   DOMAIN      376    500       DNA_LIGASE_A3. {ECO:0000259|PROSITE:
FT                                PS50160}.
SQ   SEQUENCE   608 AA;  67631 MW;  698C938655ECC5ED CRC64;
     MALEEYKKKR RFTDTPEPPP SIDKSKGHRF VVQKHHASRL HYDFRLEMDG VLKSWAVPKG
     PSLDPADKRL AMAVEDHPVS YLKFEGIIPE NNYGAGTVMV WDIGTWEPVG DADAMLAKGD
     LKFRLKGKKL NGEFALVHIK SRRSGTKGNE WLLIKHRDDA VVPGYDIDEY DFSALTKRSL
     DDIAGDQKSA EWQSNRAGSS NIPQKSAWLA DAIKKADKKA AAKKTAVKTK APAKKSAKTA
     AKKAVKTTAT KKQKDAHPAF ADLKGARHAA MPSQIQPMLA TLVDEPFEDS QWLYEIKWDG
     YRAVTFLNDG KLRFVSRNGN DLTNAYPELH DIGGSISAQR AILDGEIVAL DGEGRSSFSL
     MQQRTGIGEG GRRTGKGNAN IPVQYYAFDL LYLDGYDLTH VSLEDRKRVL SEIISPSDVL
     RVSDSFDEGL PLYEAARARG LEGIIAKRRE SCYLTKRSRE WLKIKITQRQ ECVIGGYTEP
     KGSRENFGSV VLGLYDDKGR LIPVGQAGSG FTAQSNAALW KKLQKLETKT SPFFGKPDSP
     RQVHYVRPEL VAEIKFTEWT HQGQSGQVRM RAPVFEGLRT DKSPSECVFD FAKPTKLEVK
     KAESGDAA
//
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