ID Q1R3R6_ECOUT Unreviewed; 290 AA.
AC Q1R3R6;
DT 16-MAY-2006, integrated into UniProtKB/TrEMBL.
DT 16-MAY-2006, sequence version 1.
DT 01-MAY-2013, entry version 58.
DE RecName: Full=Pseudouridine synthase;
DE EC=5.4.99.-;
GN Name=yjbC; OrderedLocusNames=UTI89_C4590;
OS Escherichia coli (strain UTI89 / UPEC).
OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales;
OC Enterobacteriaceae; Escherichia.
OX NCBI_TaxID=364106;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=UTI89 / UPEC;
RX PubMed=16585510; DOI=10.1073/pnas.0600938103;
RA Chen S.L., Hung C.S., Xu J., Reigstad C.S., Magrini V., Sabo A.,
RA Blasiar D., Bieri T., Meyer R.R., Ozersky P., Armstrong J.R.,
RA Fulton R.S., Latreille J.P., Spieth J., Hooton T.M., Mardis E.R.,
RA Hultgren S.J., Gordon J.I.;
RT "Identification of genes subject to positive selection in
RT uropathogenic strains of Escherichia coli: a comparative genomics
RT approach.";
RL Proc. Natl. Acad. Sci. U.S.A. 103:5977-5982(2006).
CC -!- SIMILARITY: Belongs to the pseudouridine synthase rsuA family.
CC -!- SIMILARITY: Contains 1 S4 RNA-binding domain.
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DR EMBL; CP000243; ABE09998.1; -; Genomic_DNA.
DR RefSeq; YP_543529.1; NC_007946.1.
DR ProteinModelPortal; Q1R3R6; -.
DR SMR; Q1R3R6; 3-242.
DR STRING; 364106.UTI89_C4590; -.
DR EnsemblBacteria; ABE09998; ABE09998; UTI89_C4590.
DR GeneID; 3991715; -.
DR KEGG; eci:UTI89_C4590; -.
DR PATRIC; 18458584; VBIEscCol42261_4469.
DR eggNOG; COG1187; -.
DR HOGENOM; HOG000044954; -.
DR KO; K06182; -.
DR OMA; MNVSLKG; -.
DR ProtClustDB; PRK10475; -.
DR BioCyc; ECOL364106:GHPQ-4552-MONOMER; -.
DR GO; GO:0016829; F:lyase activity; IEA:UniProtKB-KW.
DR GO; GO:0009982; F:pseudouridine synthase activity; IEA:InterPro.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
DR GO; GO:0001522; P:pseudouridine synthesis; IEA:InterPro.
DR Gene3D; 3.10.290.10; -; 1.
DR InterPro; IPR020103; PsdUridine_synth_cat_dom.
DR InterPro; IPR000748; PsdUridine_synth_RsuA/RluB/E/F.
DR InterPro; IPR018496; PsdUridine_synth_RsuA/RluB_CS.
DR InterPro; IPR006145; PsdUridine_synth_RsuA/RluD.
DR InterPro; IPR002942; S4_RNA-bd.
DR Pfam; PF00849; PseudoU_synth_2; 1.
DR Pfam; PF01479; S4; 1.
DR SMART; SM00363; S4; 1.
DR SUPFAM; SSF55120; PsdUridine_synth_cat_dom; 1.
DR TIGRFAMs; TIGR00093; TIGR00093; 1.
DR PROSITE; PS01149; PSI_RSU; 1.
DR PROSITE; PS50889; S4; 1.
PE 3: Inferred from homology;
KW Complete proteome; Isomerase; Lyase; RNA-binding.
SQ SEQUENCE 290 AA; 32449 MW; 478D69FB767E4B44 CRC64;
MLPDSSVRLN KYISESGICS RREADRYIEQ GNVFLNGKRA TIGDQVKPGD VVKVNGQLIE
PRESEDLVLI ALNKPVGIVS TTEDGERDNI VDFVNHSKRV FPIGRLDKDS QGLIFLTNHG
DLVNKILRAG NDHEKEYLVT VDKPITDEFI RGMGAGVPIL GTVTKKCKVK KEAPFVFRIT
LVQGLNRQIR RMCEHFGYEV KKLERTRIMN VSLSGIPLGE WRDLTDDELI DLFKLIENSS
SEAKPKAKAK PKTVGIKRPV VKMEKTAEKG GRPASNGKRF TSPGRKKKGR
//
