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Database: UniProt/TrEMBL
Entry: Q5Z608_ORYSJ
LinkDB: Q5Z608_ORYSJ
Original site: Q5Z608_ORYSJ 
ID   Q5Z608_ORYSJ            Unreviewed;       352 AA.
AC   Q5Z608;
DT   23-NOV-2004, integrated into UniProtKB/TrEMBL.
DT   23-NOV-2004, sequence version 1.
DT   30-AUG-2017, entry version 98.
DE   SubName: Full=Os06g0571100 protein {ECO:0000313|EMBL:BAF19828.1};
DE   SubName: Full=Putative HDA2 {ECO:0000313|EMBL:BAD61930.1};
DE   SubName: Full=cDNA clone:J023121P03, full insert sequence {ECO:0000313|EMBL:BAG94776.1};
GN   Name=Os06g0571100 {ECO:0000313|EMBL:BAS98318.1};
GN   OrderedLocusNames=Os06g0571100 {ECO:0000313|EMBL:BAF19828.1};
GN   ORFNames=OSNPB_060571100 {ECO:0000313|EMBL:BAS98318.1}, P0610D01.8
GN   {ECO:0000313|EMBL:BAD61930.1};
OS   Oryza sativa subsp. japonica (Rice).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade;
OC   Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX   NCBI_TaxID=39947 {ECO:0000313|EMBL:BAD61930.1};
RN   [1] {ECO:0000313|EMBL:BAD61930.1}
RP   NUCLEOTIDE SEQUENCE.
RA   Sasaki T., Matsumoto T., Katayose Y.;
RT   "Oryza sativa nipponbare(GA3) genomic DNA, chromosome 6, PAC
RT   clone:P0610D01.";
RL   Submitted (JUN-2002) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|EMBL:BAG94776.1}
RP   NUCLEOTIDE SEQUENCE.
RA   Kikuchi S., Satoh K., Nagata T., Kawagashira N., Doi K., Kishimoto N.,
RA   Yazaki J., Ishikawa M., Yamada H., Ooka H., Hotta I., Kojima K.,
RA   Namiki T., Ohneda E., Yahagi W., Suzuki K., Li C., Ohtsuki K.,
RA   Shishiki T., Otomo Y., Murakami K., Iida Y., Sugano S., Fujimura T.,
RA   Suzuki Y., Tsunoda Y., Kurosaki T., Kodama T., Masuda H.,
RA   Kobayashi M., Xie Q., Lu M., Narikawa R., Sugiyama A., Mizuno K.,
RA   Yokomizo S., Niikura J., Ikeda R., Ishibiki J., Kawamata M.,
RA   Yoshimura A., Miura J., Kusumegi T., Oka M., Ryu R., Ueda M.,
RA   Matsubara K., Kawai J., Carninci P., Adachi J., Aizawa K., Arakawa T.,
RA   Fukuda S., Hara A., Hashidume W., Hayatsu N., Imotani K., Ishii Y.,
RA   Itoh M., Kagawa I., Kondo S., Konno H., Miyazaki A., Osato N., Ota Y.,
RA   Saito R., Sasaki D., Sato K., Shibata K., Shinagawa A., Shiraki T.,
RA   Yoshino M., Hayashizaki Y.;
RT   "Collection, Mapping, and Annotation of Over 28,000 cDNA Clones from
RT   japonica Rice.";
RL   Science 301:376-379(2003).
RN   [3] {ECO:0000313|EMBL:BAF19828.1, ECO:0000313|Proteomes:UP000059680}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Nipponbare {ECO:0000313|Proteomes:UP000059680};
RX   PubMed=16100779; DOI=10.1038/nature03895;
RG   International rice genome sequencing project (IRGSP);
RT   "The map-based sequence of the rice genome.";
RL   Nature 436:793-800(2005).
RN   [4] {ECO:0000313|EMBL:BAF19828.1}
RP   NUCLEOTIDE SEQUENCE.
RG   IRGSP(International Rice Genome Sequencing Project);
RT   "Oryza sativa nipponbare(GA3) genomic DNA, chromosome 6.";
RL   Submitted (FEB-2005) to the EMBL/GenBank/DDBJ databases.
RN   [5] {ECO:0000313|EMBL:BAF19828.1}
RP   NUCLEOTIDE SEQUENCE.
RG   The Rice Annotation Project (RAP);
RT   "The Second Rice Annotation Project Meeting (RAP2).";
RL   Submitted (FEB-2005) to the EMBL/GenBank/DDBJ databases.
RN   [6] {ECO:0000313|EMBL:BAF19828.1}
RP   NUCLEOTIDE SEQUENCE.
RX   PubMed=16381971; DOI=10.1093/nar/gkj094;
RA   Ohyanagi H., Tanaka T., Sakai H., Shigemoto Y., Yamaguchi K.,
RA   Habara T., Fujii Y., Antonio B.A., Nagamura Y., Imanishi T., Ikeo K.,
RA   Itoh T., Gojobori T., Sasaki T.;
RT   "The Rice Annotation Project Database (RAP-DB): hub for Oryza sativa
RT   ssp. japonica genome information.";
RL   Nucleic Acids Res. 34:D741-D744(2006).
RN   [7] {ECO:0000313|EMBL:BAF19828.1}
RP   NUCLEOTIDE SEQUENCE.
RG   The Rice Annotation Project (RAP);
RA   Itoh T., Tanaka T., Barrero R.A., Yamasaki C., Fujii Y., Hilton P.B.,
RA   Antonio B.A., Aono H., Apweiler R., Bruskiewich R., Bureau T.,
RA   Burr F., Costa de Oliveira A., Fuks G., Habara T., Haberer G., Han B.,
RA   Harada E., Hiraki A.T., Hirochika H., Hoen D., Hokari H., Hosokawa S.,
RA   Hsing Y., Ikawa H., Ikeo K., Imanishi T., Ito Y., Jaiswal P.,
RA   Kanno M., Kawahara Y., Kawamura T., Kawashima H., Khurana J.P.,
RA   Kikuchi S., Komatsu S., Koyanagi K.O., Kubooka H., Lieberherr D.,
RA   Lin Y.C., Lonsdale D., Matsumoto T., Matsuya A., McCombie W.R.,
RA   Messing J., Miyao A., Mulder N., Nagamura Y., Nam J., Namiki N.,
RA   Numa H., Nurimoto S., O'donovan C., Ohyanagi H., Okido T., Oota S.,
RA   Osato N., Palmer L.E., Quetier F., Raghuvanshi S., Saichi N.,
RA   Sakai H., Sakai Y., Sakata K., Sakurai T., Sato F., Sato Y.,
RA   Schoof H., Seki M., Shibata M., Shimizu Y., Shinozaki K., Shinso Y.,
RA   Singh N.K., Smith-White B., Takeda J., Tanino M., Tatusova T.,
RA   Thongjuea S., Todokoro F., Tsugane M., Tyagi A.K., Vanavichit A.,
RA   Wang A., Wing R.A., Yamaguchi K., Yamamoto M., Yamamoto N., Yu Y.,
RA   Zhang H., Zhao Q., Higo K., Burr B., Gojobori T., Sasaki T.;
RT   "Curated Genome Annotation of Oryza sativa ssp. japonica and
RT   Comparative Genome Analysis with Arabidopsis thaliana.";
RL   Genome Res. 17:175-183(2007).
RN   [8] {ECO:0000313|EMBL:BAF19828.1}
RP   NUCLEOTIDE SEQUENCE.
RG   The Rice Annotation Project (RAP);
RA   Tanaka T., Antonio B.A., Kikuchi S., Matsumoto T., Nagamura Y.,
RA   Numa H., Sakai H., Wu J., Itoh T., Sasaki T., Aono R., Fujii Y.,
RA   Habara T., Harada E., Kanno M., Kawahara Y., Kawashima H., Kubooka H.,
RA   Matsuya A., Nakaoka H., Saichi N., Sanbonmatsu R., Sato Y., Shinso Y.,
RA   Suzuki M., Takeda J., Tanino M., Todokoro F., Yamaguchi K.,
RA   Yamamoto N., Yamasaki C., Imanishi T., Okido T., Tada M., Ikeo K.,
RA   Tateno Y., Gojobori T., Lin Y.C., Wei F.J., Hsing Y.I., Zhao Q.,
RA   Han B., Kramer M.R., McCombie R.W., Lonsdale D., O'Donovan C.C.,
RA   Whitfield E.J., Apweiler R., Koyanagi K.O., Khurana J.P.,
RA   Raghuvanshi S., Singh N.K., Tyagi A.K., Haberer G., Fujisawa M.,
RA   Hosokawa S., Ito Y., Ikawa H., Shibata M., Yamamoto M.,
RA   Bruskiewich R.M., Hoen D.R., Bureau TE., Namiki N., Ohyanagi H.,
RA   Sakai Y., Nobushima S., Sakata K., Barrero R.A., Sato Y., Souvorov A.,
RA   Smith-White B., Tatusova T., An S., An G., OOta S., Fuks G.,
RA   Messing J., Christie K.R., Lieberherr D., Kim H., Zuccolo A.,
RA   Wing R.A., Nobuta K., Green P.J., Lu C., Meyers BC., Chaparro C.,
RA   Piegu B., Panaud O., Echeverria M.;
RT   "The Rice Annotation Project Database (RAP-DB): 2008 update.";
RL   Nucleic Acids Res. 36:D1028-D1033(2008).
RN   [9] {ECO:0000313|EMBL:BAS98318.1}
RP   NUCLEOTIDE SEQUENCE.
RX   PubMed=23299411; DOI=10.1093/pcp/pcs183;
RA   Sakai H., Lee S.S., Tanaka T., Numa H., Kim J., Kawahara Y.,
RA   Wakimoto H., Yang C.C., Iwamoto M., Abe T., Yamada Y., Muto A.,
RA   Inokuchi H., Ikemura T., Matsumoto T., Sasaki T., Itoh T.;
RT   "Rice Annotation Project Database (RAP-DB): an integrative and
RT   interactive database for rice genomics.";
RL   Plant Cell Physiol. 54:E6-E6(2013).
RN   [10] {ECO:0000313|EMBL:BAS98318.1, ECO:0000313|Proteomes:UP000059680}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Nipponbare {ECO:0000313|Proteomes:UP000059680};
RX   PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA   Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H.,
RA   McCombie W.R., Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S.,
RA   Childs K.L., Davidson R.M., Lin H., Quesada-Ocampo L.,
RA   Vaillancourt B., Sakai H., Lee S.S., Kim J., Numa H., Itoh T.,
RA   Buell C.R., Matsumoto T.;
RT   "Improvement of the Oryza sativa Nipponbare reference genome using
RT   next generation sequence and optical map data.";
RL   Rice 6:4-4(2013).
RN   [11] {ECO:0000313|EMBL:BAS98318.1}
RP   NUCLEOTIDE SEQUENCE.
RA   Millard Andrew;
RL   Submitted (OCT-2015) to the EMBL/GenBank/DDBJ databases.
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DR   EMBL; AP005460; BAD61930.1; -; Genomic_DNA.
DR   EMBL; AP008212; BAF19828.1; -; Genomic_DNA.
DR   EMBL; AK100812; BAG94776.1; -; mRNA.
DR   EMBL; AP014962; BAS98318.1; -; Genomic_DNA.
DR   RefSeq; XP_015640935.1; XM_015785449.1.
DR   UniGene; Os.53917; -.
DR   STRING; 39947.LOC_Os06g37420.1; -.
DR   EnsemblPlants; OS06T0571100-01; OS06T0571100-01; OS06G0571100.
DR   GeneID; 4341352; -.
DR   Gramene; OS06T0571100-01; OS06T0571100-01; OS06G0571100.
DR   KEGG; osa:4341352; -.
DR   eggNOG; KOG1344; Eukaryota.
DR   eggNOG; COG0123; LUCA.
DR   KO; K11418; -.
DR   OMA; RVFTFSM; -.
DR   OrthoDB; EOG09360ETX; -.
DR   Proteomes; UP000059680; Chromosome 6.
DR   GO; GO:0016787; F:hydrolase activity; IEA:UniProtKB-KW.
DR   Gene3D; 3.40.800.20; -; 1.
DR   InterPro; IPR000286; His_deacetylse.
DR   InterPro; IPR023801; His_deacetylse_dom.
DR   Pfam; PF00850; Hist_deacetyl; 1.
DR   PRINTS; PR01270; HDASUPER.
PE   2: Evidence at transcript level;
KW   Complete proteome {ECO:0000313|Proteomes:UP000059680};
KW   Hydrolase {ECO:0000256|SAAS:SAAS00671995};
KW   Reference proteome {ECO:0000313|Proteomes:UP000059680}.
FT   DOMAIN       58    335       Hist_deacetyl. {ECO:0000259|Pfam:
FT                                PF00850}.
SQ   SEQUENCE   352 AA;  38741 MW;  F0D016A477870B4E CRC64;
     MASSAPSAAA GATPPDPLRR DRILSSKLYL DVPGSKAPVV YSPAYDIAFL GIEKLHPFDS
     SKWGRICKFL TKEGHLEKNR VVEPLEATKD DLLVVHSESY LNSLKSSLKV ASIVELPPVA
     FIPNWLVQQK LLYPFRKQVG GSILSAKLAL ERGWAINVGG GFHHCSAEQG GGFCAYADIS
     LCIQFAFVRL NISRVMIIDL DAHQGNGHEK DFANDGRVYT LDMYNAGIYP YDHVAKRYID
     QKVELVSGTK TEDYLDQLDK ALKVAESRFQ PQLIVYNAGT DILDGDPLGR LKISPQGVVI
     RDEKVFRFAK DQSIPLLMLT SGGYMKSSAR VIADSIINLS NKNLIELGSQ LG
//
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