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Entry: Q652Z5_ORYSJ
LinkDB: Q652Z5_ORYSJ
Original site: Q652Z5_ORYSJ 
ID   Q652Z5_ORYSJ            Unreviewed;       694 AA.
AC   Q652Z5;
DT   25-OCT-2004, integrated into UniProtKB/TrEMBL.
DT   25-OCT-2004, sequence version 1.
DT   06-JUL-2016, entry version 98.
DE   SubName: Full=Os06g0527100 protein {ECO:0000313|EMBL:BAF19681.1};
DE   SubName: Full=Putative cyclic nucleotide-gated calmodulin-binding ion channel {ECO:0000313|EMBL:BAD46122.1};
GN   OrderedLocusNames=Os06g0527100 {ECO:0000313|EMBL:BAF19681.1};
GN   ORFNames=OSJNBa0043B22.29 {ECO:0000313|EMBL:BAD46122.1},
GN   OSNPB_060527100 {ECO:0000313|EMBL:BAS98043.1}, P0001B01.9
GN   {ECO:0000313|EMBL:BAD54193.1};
OS   Oryza sativa subsp. japonica (Rice).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade;
OC   Oryzoideae; Oryzeae; Oryzinae; Oryza.
OX   NCBI_TaxID=39947 {ECO:0000313|EMBL:BAD46122.1};
RN   [1] {ECO:0000313|EMBL:BAD54193.1}
RP   NUCLEOTIDE SEQUENCE.
RA   Sasaki T., Matsumoto T., Yamamoto K.;
RT   "Oryza sativa nipponbare(GA3) genomic DNA, chromosome 6, PAC
RT   clone:P0001B01.";
RL   Submitted (FEB-2002) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|EMBL:BAD46122.1}
RP   NUCLEOTIDE SEQUENCE.
RA   Sasaki T., Matsumoto T., Katayose Y.;
RT   "Oryza sativa nipponbare(GA3) genomic DNA, chromosome 6, BAC
RT   clone:OSJNBa0043B22.";
RL   Submitted (JUN-2002) to the EMBL/GenBank/DDBJ databases.
RN   [3] {ECO:0000313|EMBL:BAF19681.1, ECO:0000313|Proteomes:UP000059680}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Nipponbare {ECO:0000313|Proteomes:UP000059680};
RX   PubMed=16100779; DOI=10.1038/nature03895;
RG   International rice genome sequencing project (IRGSP);
RT   "The map-based sequence of the rice genome.";
RL   Nature 436:793-800(2005).
RN   [4] {ECO:0000313|EMBL:BAF19681.1}
RP   NUCLEOTIDE SEQUENCE.
RG   IRGSP(International Rice Genome Sequencing Project);
RT   "Oryza sativa nipponbare(GA3) genomic DNA, chromosome 6.";
RL   Submitted (FEB-2005) to the EMBL/GenBank/DDBJ databases.
RN   [5] {ECO:0000313|EMBL:BAF19681.1}
RP   NUCLEOTIDE SEQUENCE.
RG   The Rice Annotation Project (RAP);
RT   "The Second Rice Annotation Project Meeting (RAP2).";
RL   Submitted (FEB-2005) to the EMBL/GenBank/DDBJ databases.
RN   [6] {ECO:0000313|EMBL:BAF19681.1}
RP   NUCLEOTIDE SEQUENCE.
RX   PubMed=16381971; DOI=10.1093/nar/gkj094;
RA   Ohyanagi H., Tanaka T., Sakai H., Shigemoto Y., Yamaguchi K.,
RA   Habara T., Fujii Y., Antonio B.A., Nagamura Y., Imanishi T., Ikeo K.,
RA   Itoh T., Gojobori T., Sasaki T.;
RT   "The Rice Annotation Project Database (RAP-DB): hub for Oryza sativa
RT   ssp. japonica genome information.";
RL   Nucleic Acids Res. 34:D741-D744(2006).
RN   [7] {ECO:0000313|EMBL:BAF19681.1}
RP   NUCLEOTIDE SEQUENCE.
RG   The Rice Annotation Project (RAP);
RA   Itoh T., Tanaka T., Barrero R.A., Yamasaki C., Fujii Y., Hilton P.B.,
RA   Antonio B.A., Aono H., Apweiler R., Bruskiewich R., Bureau T.,
RA   Burr F., Costa de Oliveira A., Fuks G., Habara T., Haberer G., Han B.,
RA   Harada E., Hiraki A.T., Hirochika H., Hoen D., Hokari H., Hosokawa S.,
RA   Hsing Y., Ikawa H., Ikeo K., Imanishi T., Ito Y., Jaiswal P.,
RA   Kanno M., Kawahara Y., Kawamura T., Kawashima H., Khurana J.P.,
RA   Kikuchi S., Komatsu S., Koyanagi K.O., Kubooka H., Lieberherr D.,
RA   Lin Y.C., Lonsdale D., Matsumoto T., Matsuya A., McCombie W.R.,
RA   Messing J., Miyao A., Mulder N., Nagamura Y., Nam J., Namiki N.,
RA   Numa H., Nurimoto S., O'donovan C., Ohyanagi H., Okido T., Oota S.,
RA   Osato N., Palmer L.E., Quetier F., Raghuvanshi S., Saichi N.,
RA   Sakai H., Sakai Y., Sakata K., Sakurai T., Sato F., Sato Y.,
RA   Schoof H., Seki M., Shibata M., Shimizu Y., Shinozaki K., Shinso Y.,
RA   Singh N.K., Smith-White B., Takeda J., Tanino M., Tatusova T.,
RA   Thongjuea S., Todokoro F., Tsugane M., Tyagi A.K., Vanavichit A.,
RA   Wang A., Wing R.A., Yamaguchi K., Yamamoto M., Yamamoto N., Yu Y.,
RA   Zhang H., Zhao Q., Higo K., Burr B., Gojobori T., Sasaki T.;
RT   "Curated Genome Annotation of Oryza sativa ssp. japonica and
RT   Comparative Genome Analysis with Arabidopsis thaliana.";
RL   Genome Res. 17:175-183(2007).
RN   [8] {ECO:0000313|EMBL:BAF19681.1}
RP   NUCLEOTIDE SEQUENCE.
RG   The Rice Annotation Project (RAP);
RA   Tanaka T., Antonio B.A., Kikuchi S., Matsumoto T., Nagamura Y.,
RA   Numa H., Sakai H., Wu J., Itoh T., Sasaki T., Aono R., Fujii Y.,
RA   Habara T., Harada E., Kanno M., Kawahara Y., Kawashima H., Kubooka H.,
RA   Matsuya A., Nakaoka H., Saichi N., Sanbonmatsu R., Sato Y., Shinso Y.,
RA   Suzuki M., Takeda J., Tanino M., Todokoro F., Yamaguchi K.,
RA   Yamamoto N., Yamasaki C., Imanishi T., Okido T., Tada M., Ikeo K.,
RA   Tateno Y., Gojobori T., Lin Y.C., Wei F.J., Hsing Y.I., Zhao Q.,
RA   Han B., Kramer M.R., McCombie R.W., Lonsdale D., O'Donovan C.C.,
RA   Whitfield E.J., Apweiler R., Koyanagi K.O., Khurana J.P.,
RA   Raghuvanshi S., Singh N.K., Tyagi A.K., Haberer G., Fujisawa M.,
RA   Hosokawa S., Ito Y., Ikawa H., Shibata M., Yamamoto M.,
RA   Bruskiewich R.M., Hoen D.R., Bureau TE., Namiki N., Ohyanagi H.,
RA   Sakai Y., Nobushima S., Sakata K., Barrero R.A., Sato Y., Souvorov A.,
RA   Smith-White B., Tatusova T., An S., An G., OOta S., Fuks G.,
RA   Messing J., Christie K.R., Lieberherr D., Kim H., Zuccolo A.,
RA   Wing R.A., Nobuta K., Green P.J., Lu C., Meyers BC., Chaparro C.,
RA   Piegu B., Panaud O., Echeverria M.;
RT   "The Rice Annotation Project Database (RAP-DB): 2008 update.";
RL   Nucleic Acids Res. 36:D1028-D1033(2008).
RN   [9] {ECO:0000313|EMBL:BAS98043.1}
RP   NUCLEOTIDE SEQUENCE.
RX   PubMed=23299411; DOI=10.1093/pcp/pcs183;
RA   Sakai H., Lee S.S., Tanaka T., Numa H., Kim J., Kawahara Y.,
RA   Wakimoto H., Yang C.C., Iwamoto M., Abe T., Yamada Y., Muto A.,
RA   Inokuchi H., Ikemura T., Matsumoto T., Sasaki T., Itoh T.;
RT   "Rice Annotation Project Database (RAP-DB): an integrative and
RT   interactive database for rice genomics.";
RL   Plant Cell Physiol. 54:E6-E6(2013).
RN   [10] {ECO:0000313|EMBL:BAS98043.1, ECO:0000313|Proteomes:UP000059680}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Nipponbare {ECO:0000313|Proteomes:UP000059680};
RX   PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA   Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H.,
RA   McCombie W.R., Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S.,
RA   Childs K.L., Davidson R.M., Lin H., Quesada-Ocampo L.,
RA   Vaillancourt B., Sakai H., Lee S.S., Kim J., Numa H., Itoh T.,
RA   Buell C.R., Matsumoto T.;
RT   "Improvement of the Oryza sativa Nipponbare reference genome using
RT   next generation sequence and optical map data.";
RL   Rice 6:4-4(2013).
RN   [11] {ECO:0000313|EMBL:BAS98043.1}
RP   NUCLEOTIDE SEQUENCE.
RA   Millard Andrew;
RL   Submitted (OCT-2015) to the EMBL/GenBank/DDBJ databases.
CC   -!- SIMILARITY: Contains cyclic nucleotide-binding domain.
CC       {ECO:0000256|SAAS:SAAS00502589}.
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DR   EMBL; AP005470; BAD46122.1; -; Genomic_DNA.
DR   EMBL; AP004745; BAD54193.1; -; Genomic_DNA.
DR   EMBL; AP008212; BAF19681.1; -; Genomic_DNA.
DR   EMBL; AP014962; BAS98043.1; -; Genomic_DNA.
DR   RefSeq; XP_015643088.1; XM_015787602.1.
DR   UniGene; Os.20835; -.
DR   STRING; 39947.LOC_Os06g33570.1; -.
DR   EnsemblPlants; OS06T0527100-01; OS06T0527100-01; OS06G0527100.
DR   GeneID; 4341189; -.
DR   Gramene; OS06T0527100-01; OS06T0527100-01; OS06G0527100.
DR   KEGG; osa:4341189; -.
DR   eggNOG; KOG0498; Eukaryota.
DR   eggNOG; ENOG410XPSE; LUCA.
DR   HOGENOM; HOG000238338; -.
DR   KO; K05391; -.
DR   OMA; VINDKIP; -.
DR   Reactome; R-OSA-2485179; Activation of the phototransduction cascade.
DR   Reactome; R-OSA-2514859; Inactivation, recovery and regulation of the phototransduction cascade.
DR   Reactome; R-OSA-5620916; VxPx cargo-targeting to cilium.
DR   Proteomes; UP000059680; Chromosome 6.
DR   GO; GO:0005887; C:integral component of plasma membrane; IBA:GO_Central.
DR   GO; GO:0005249; F:voltage-gated potassium channel activity; IBA:GO_Central.
DR   GO; GO:0042391; P:regulation of membrane potential; IBA:GO_Central.
DR   Gene3D; 2.60.120.10; -; 1.
DR   InterPro; IPR018490; cNMP-bd-like.
DR   InterPro; IPR000595; cNMP-bd_dom.
DR   InterPro; IPR005821; Ion_trans_dom.
DR   InterPro; IPR003938; K_chnl_volt-dep_EAG/ELK/ERG.
DR   InterPro; IPR014710; RmlC-like_jellyroll.
DR   Pfam; PF00520; Ion_trans; 1.
DR   PRINTS; PR01463; EAGCHANLFMLY.
DR   SMART; SM00100; cNMP; 1.
DR   SUPFAM; SSF51206; SSF51206; 1.
DR   PROSITE; PS50042; CNMP_BINDING_3; 1.
PE   4: Predicted;
KW   Complete proteome {ECO:0000313|Proteomes:UP000059680};
KW   Ion channel {ECO:0000256|RuleBase:RU003378,
KW   ECO:0000256|SAAS:SAAS00502815};
KW   Ion transport {ECO:0000256|RuleBase:RU003378,
KW   ECO:0000256|SAAS:SAAS00502700};
KW   Membrane {ECO:0000256|SAAS:SAAS00502630, ECO:0000256|SAM:Phobius};
KW   Reference proteome {ECO:0000313|Proteomes:UP000059680};
KW   Transmembrane {ECO:0000256|RuleBase:RU003378,
KW   ECO:0000256|SAAS:SAAS00502809, ECO:0000256|SAM:Phobius};
KW   Transmembrane helix {ECO:0000256|SAAS:SAAS00502857,
KW   ECO:0000256|SAM:Phobius};
KW   Transport {ECO:0000256|RuleBase:RU003378,
KW   ECO:0000256|SAAS:SAAS00502637}.
FT   TRANSMEM     81    101       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    169    189       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    239    263       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    362    382       Helical. {ECO:0000256|SAM:Phobius}.
FT   DOMAIN      465    549       Cyclic nucleotide-binding.
FT                                {ECO:0000259|PROSITE:PS50042}.
SQ   SEQUENCE   694 AA;  80194 MW;  77C847080D2C6762 CRC64;
     MMMGREDKYV RFEDWRSEQS VMSPRRHNAL SSLKERTAGV FAFLGNLVHS ETLKRLVLHE
     RKLTTRTLHP QGPFLQSWNK IFVLSCIFAV SVDPLFFYIP VINDNNTCWY LDKKLEITAS
     VLRFFTDIFY ILHIIFQFRT GYIASSLTTF GRGVLVEDRY AIAKRYLSTY FLIDVFAVLP
     LPQVVILVVL PNLGGSEVTK AKNILMFIVI CQYVPRLIRI RPLYLQITRS AGVITETPWA
     GAVLNLLIYL LASHVLGALW YLLSIERKDA CWRDMCSNNS TVCNQAYLYC GDKENSILRT
     ACLPIDSNDI DPNFGIYVPA LNNVSQSTNF LAKLFYCVWW GLQNLSSLGQ NLKTSTYAWE
     NLFAVFVSIS GLVLFALLIG NVQTYLQSAH LREEEMRVKS RDTDQWMSYR LLPENLKERI
     RRHEKYRWHQ TSGVDEELLL MNLPKDLRRA IKRHLCLSLL MRVPMFENMD DQLLNALCDR
     LKPVLYTEGS CIIREEDPVN EMLFIMRGNL MSMTTNGGRT GFFNSDVLKG GDFCGEELLT
     WALDPTSVSS LPSSTRTVKT MSEVEAFALR AEDLKFVATQ FRRLHSKQLQ HTFKFYSQHW
     RTWAACFIQA AWHRYCRKKI EDSLREKEKR LQFAIVNDGA TTLSFRAAIY ASRFAGNMMR
     ILRRNATRKA RLKESVPARL LQKPAEPNFA AEEQ
//
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