ID Q6C330_YARLI Unreviewed; 638 AA.
AC Q6C330;
DT 16-AUG-2004, integrated into UniProtKB/TrEMBL.
DT 16-AUG-2004, sequence version 1.
DT 24-JAN-2024, entry version 115.
DE SubName: Full=YALI0F03069p {ECO:0000313|EMBL:CAG77737.1};
GN ORFNames=YALI0_F03069g {ECO:0000313|EMBL:CAG77737.1};
OS Yarrowia lipolytica (strain CLIB 122 / E 150) (Yeast) (Candida lipolytica).
OC Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes;
OC Saccharomycetales; Dipodascaceae; Yarrowia.
OX NCBI_TaxID=284591 {ECO:0000313|EMBL:CAG77737.1, ECO:0000313|Proteomes:UP000001300};
RN [1] {ECO:0000313|EMBL:CAG77737.1, ECO:0000313|Proteomes:UP000001300}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=CLIB 122 / E 150 {ECO:0000313|Proteomes:UP000001300};
RX PubMed=15229592; DOI=10.1038/nature02579;
RG Genolevures;
RA Dujon B., Sherman D., Fischer G., Durrens P., Casaregola S., Lafontaine I.,
RA de Montigny J., Marck C., Neuveglise C., Talla E., Goffard N., Frangeul L.,
RA Aigle M., Anthouard V., Babour A., Barbe V., Barnay S., Blanchin S.,
RA Beckerich J.M., Beyne E., Bleykasten C., Boisrame A., Boyer J.,
RA Cattolico L., Confanioleri F., de Daruvar A., Despons L., Fabre E.,
RA Fairhead C., Ferry-Dumazet H., Groppi A., Hantraye F., Hennequin C.,
RA Jauniaux N., Joyet P., Kachouri R., Kerrest A., Koszul R., Lemaire M.,
RA Lesur I., Ma L., Muller H., Nicaud J.M., Nikolski M., Oztas S.,
RA Ozier-Kalogeropoulos O., Pellenz S., Potier S., Richard G.F., Straub M.L.,
RA Suleau A., Swennene D., Tekaia F., Wesolowski-Louvel M., Westhof E.,
RA Wirth B., Zeniou-Meyer M., Zivanovic I., Bolotin-Fukuhara M., Thierry A.,
RA Bouchier C., Caudron B., Scarpelli C., Gaillardin C., Weissenbach J.,
RA Wincker P., Souciet J.L.;
RT "Genome evolution in yeasts.";
RL Nature 430:35-44(2004).
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DR EMBL; CR382132; CAG77737.1; -; Genomic_DNA.
DR RefSeq; XP_504932.1; XM_504932.1.
DR AlphaFoldDB; Q6C330; -.
DR STRING; 284591.Q6C330; -.
DR EnsemblFungi; CAG77737; CAG77737; YALI0_F03069g.
DR GeneID; 2907757; -.
DR KEGG; yli:YALI0F03069g; -.
DR VEuPathDB; FungiDB:YALI0_F03069g; -.
DR HOGENOM; CLU_429068_0_0_1; -.
DR InParanoid; Q6C330; -.
DR OrthoDB; 124870at2759; -.
DR Proteomes; UP000001300; Chromosome F.
DR GO; GO:0070210; C:Rpd3L-Expanded complex; IBA:GO_Central.
DR GO; GO:0034967; C:Set3 complex; IBA:GO_Central.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0035064; F:methylated histone binding; IBA:GO_Central.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IBA:GO_Central.
DR CDD; cd15550; PHD_MLL5; 1.
DR Gene3D; 2.170.270.10; SET domain; 1.
DR Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 1.
DR InterPro; IPR001214; SET_dom.
DR InterPro; IPR046341; SET_dom_sf.
DR InterPro; IPR019786; Zinc_finger_PHD-type_CS.
DR InterPro; IPR011011; Znf_FYVE_PHD.
DR InterPro; IPR001965; Znf_PHD.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR PANTHER; PTHR46462; UPSET, ISOFORM A; 1.
DR PANTHER; PTHR46462:SF3; UPSET, ISOFORM A; 1.
DR Pfam; PF20826; PHD_5; 1.
DR Pfam; PF00856; SET; 1.
DR SMART; SM00249; PHD; 1.
DR SMART; SM00317; SET; 1.
DR SUPFAM; SSF57903; FYVE/PHD zinc finger; 1.
DR SUPFAM; SSF82199; SET domain; 1.
DR PROSITE; PS50280; SET; 1.
DR PROSITE; PS01359; ZF_PHD_1; 1.
PE 4: Predicted;
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Reference proteome {ECO:0000313|Proteomes:UP000001300};
KW Zinc {ECO:0000256|ARBA:ARBA00022833};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771}.
FT DOMAIN 175..304
FT /note="SET"
FT /evidence="ECO:0000259|PROSITE:PS50280"
FT REGION 66..134
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 372..410
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 477..546
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 586..638
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 66..94
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 95..119
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 372..407
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 494..540
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 638 AA; 71581 MW; 2CE2F565EA239EA0 CRC64;
MKYAVDAGII KCICGFDEDD GFTIQCESCN VWQHAVCVGI GSEAEVPDVY LCDQCGPREL
DVKAAHEKQK TRLETIKQMQ EKKRRKESEE KEGQSNGDAS ATTQATQTPP VAPSRESTEQ
PNNEENDYHF DYTVIPRNTV DPEVKDYLAK LANEEIIDKD ISYMSLSEYS KIVKPKMTLK
LFQDNPKSKF CGFSKHGLVA NQPIQKDRFI IEYVGHVSHK DQYKADPINQ YRIHPVPKSS
VLFHPTLPLV IDGRLVGNDA RFMRRSCNPN CRVATVVVNN TDIIFVVFAT EPIKPGTELT
LAWEWDTHHP VQKMLHGTEI DQLTPQEKLC LGNMVETILQ RTECSDPTNS QCILQKMKKC
VSANPRSVRG SKTRALNLLK ETNGEGGSSY EDSGKSSSAS PNPELLPGSQ ELSVGFGIGS
SYKGYGGYGG IQFPSPVPPT CMDYLDKLDD EHRTIALDYI EAFAYVDPPY YERVQEPVSV
PRTPKSPFLS PSLKRKEAPE RDDQISKETQ TVPIDKRLRS GESSSIKLEF QDERSAATSE
EDPIQPRTIP FKTNLYRMYQ VRSACPEPAP PSPVVTTSFK RLTMKEYFDH PTGTPSKEIK
PKVEEKGSES PVDDRRNSGA KKGKLSFADY MKQKKRGA
//
