ID Q73UP2_MYCPA Unreviewed; 268 AA.
AC Q73UP2;
DT 05-JUL-2004, integrated into UniProtKB/TrEMBL.
DT 05-JUL-2004, sequence version 1.
DT 01-MAY-2013, entry version 61.
DE RecName: Full=RNA polymerase sigma factor;
GN Name=sigH; OrderedLocusNames=MAP_3324c;
OS Mycobacterium paratuberculosis (strain ATCC BAA-968 / K-10).
OC Bacteria; Actinobacteria; Actinobacteridae; Actinomycetales;
OC Corynebacterineae; Mycobacteriaceae; Mycobacterium;
OC Mycobacterium avium complex (MAC).
OX NCBI_TaxID=262316;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC BAA-968 / K-10;
RX PubMed=16116077; DOI=10.1073/pnas.0505662102;
RA Li L., Bannantine J.P., Zhang Q., Amonsin A., May B.J., Alt D.,
RA Banerji N., Kanjilal S., Kapur V.;
RT "The complete genome sequence of Mycobacterium avium subspecies
RT paratuberculosis.";
RL Proc. Natl. Acad. Sci. U.S.A. 102:12344-12349(2005).
CC -!- SIMILARITY: Belongs to the sigma-70 factor family. ECF subfamily.
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DR EMBL; AE016958; AAS05874.1; -; Genomic_DNA.
DR RefSeq; NP_962258.1; NC_002944.2.
DR ProteinModelPortal; Q73UP2; -.
DR SMR; Q73UP2; 72-147.
DR STRING; 262316.MAP3324c; -.
DR EnsemblBacteria; AAS05874; AAS05874; MAP_3324c.
DR GeneID; 2718726; -.
DR KEGG; mpa:MAP3324c; -.
DR PATRIC; 17999448; VBIMycAvi108102_3531.
DR KO; K03088; -.
DR OMA; GRRQLRD; -.
DR ProtClustDB; PRK09652; -.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.
DR GO; GO:0016987; F:sigma factor activity; IEA:UniProtKB-KW.
DR GO; GO:0006352; P:DNA-dependent transcription, initiation; IEA:InterPro.
DR Gene3D; 1.10.10.10; -; 1.
DR InterPro; IPR014284; RNA_pol_sigma-70_dom.
DR InterPro; IPR014293; RNA_pol_sigma70_actinobac.
DR InterPro; IPR000838; RNA_pol_sigma70_ECF_CS.
DR InterPro; IPR007627; RNA_pol_sigma70_r2.
DR InterPro; IPR013249; RNA_pol_sigma70_r4_t2.
DR InterPro; IPR013325; RNA_pol_sigma_r2.
DR InterPro; IPR013324; RNA_pol_sigma_r3_r4.
DR InterPro; IPR011991; WHTH_DNA-bd_dom.
DR Pfam; PF04542; Sigma70_r2; 1.
DR Pfam; PF08281; Sigma70_r4_2; 1.
DR SUPFAM; SSF88946; Sigma_r2; 1.
DR SUPFAM; SSF88659; Sigma_r3_r4; 1.
DR TIGRFAMs; TIGR02947; SigH_actino; 1.
DR TIGRFAMs; TIGR02937; sigma70-ECF; 1.
DR PROSITE; PS01063; SIGMA70_ECF; 1.
PE 3: Inferred from homology;
KW Complete proteome; DNA-binding; Sigma factor; Transcription;
KW Transcription regulation.
SQ SEQUENCE 268 AA; 29499 MW; AB8954A8A2A07B2C CRC64;
MVSTATSLLG EEQLAGFLAS PGALSVLSGD TAAEGTGFIE MADSPDGPDG VTSPEVPEAH
AEPAAHEEAR EETDAELTAR FERDAIPLLD QLYGGALRMT RNPADAEDLL QETMVKAYAG
FRSFRAGTNL KAWLYRILTN TYINSYRKKQ RQPAEYPTEE ITDWQLASNA EHSSTGLRSA
EVEALESLPD SEIKDALQAL PEEFRMAVYY ADVEGFPYKE IAEIMDTPIG TVMSRLHRGR
RQLRGLLADV AKERGFNRGQ QTHEEVSS
//
