GenomeNet

Database: UniProt/TrEMBL
Entry: Q7CW11_AGRT5
LinkDB: Q7CW11_AGRT5
Original site: Q7CW11_AGRT5 
ID   Q7CW11_AGRT5            Unreviewed;       319 AA.
AC   Q7CW11;
DT   05-JUL-2004, integrated into UniProtKB/TrEMBL.
DT   15-JAN-2008, sequence version 2.
DT   11-DEC-2013, entry version 71.
DE   SubName: Full=2-deoxyribose-5-phosphate aldolase;
GN   Name=deoC; OrderedLocusNames=Atu4848;
OS   Agrobacterium tumefaciens (strain C58 / ATCC 33970).
OC   Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales;
OC   Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium;
OC   Agrobacterium tumefaciens complex.
OX   NCBI_TaxID=176299;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=C58 / ATCC 33970;
RX   PubMed=11743193; DOI=10.1126/science.1066804;
RA   Wood D.W., Setubal J.C., Kaul R., Monks D.E., Kitajima J.P.,
RA   Okura V.K., Zhou Y., Chen L., Wood G.E., Almeida N.F. Jr., Woo L.,
RA   Chen Y., Paulsen I.T., Eisen J.A., Karp P.D., Bovee D. Sr.,
RA   Chapman P., Clendenning J., Deatherage G., Gillet W., Grant C.,
RA   Kutyavin T., Levy R., Li M.-J., McClelland E., Palmieri A.,
RA   Raymond C., Rouse G., Saenphimmachak C., Wu Z., Romero P., Gordon D.,
RA   Zhang S., Yoo H., Tao Y., Biddle P., Jung M., Krespan W., Perry M.,
RA   Gordon-Kamm B., Liao L., Kim S., Hendrick C., Zhao Z.-Y., Dolan M.,
RA   Chumley F., Tingey S.V., Tomb J.-F., Gordon M.P., Olson M.V.,
RA   Nester E.W.;
RT   "The genome of the natural genetic engineer Agrobacterium tumefaciens
RT   C58.";
RL   Science 294:2317-2323(2001).
RN   [2]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=C58 / ATCC 33970;
RX   PubMed=11743194; DOI=10.1126/science.1066803;
RA   Goodner B., Hinkle G., Gattung S., Miller N., Blanchard M.,
RA   Qurollo B., Goldman B.S., Cao Y., Askenazi M., Halling C., Mullin L.,
RA   Houmiel K., Gordon J., Vaudin M., Iartchouk O., Epp A., Liu F.,
RA   Wollam C., Allinger M., Doughty D., Scott C., Lappas C., Markelz B.,
RA   Flanagan C., Crowell C., Gurson J., Lomo C., Sear C., Strub G.,
RA   Cielo C., Slater S.;
RT   "Genome sequence of the plant pathogen and biotechnology agent
RT   Agrobacterium tumefaciens C58.";
RL   Science 294:2323-2328(2001).
CC   -!- FUNCTION: Catalyzes a reversible aldol reaction between
CC       acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-
CC       D-ribose 5-phosphate (By similarity).
CC   -!- CATALYTIC ACTIVITY: 2-deoxy-D-ribose 5-phosphate = D-
CC       glyceraldehyde 3-phosphate + acetaldehyde.
CC   -!- PATHWAY: Carbohydrate degradation; 2-deoxy-D-ribose 1-phosphate
CC       degradation; D-glyceraldehyde 3-phosphate and acetaldehyde from 2-
CC       deoxy-alpha-D-ribose 1-phosphate: step 2/2.
CC   -!- SUBCELLULAR LOCATION: Cytoplasm (By similarity).
CC   -----------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution-NoDerivs License
CC   -----------------------------------------------------------------------
DR   EMBL; AE007870; AAK88601.2; -; Genomic_DNA.
DR   RefSeq; NP_355816.2; NC_003063.2.
DR   ProteinModelPortal; Q7CW11; -.
DR   STRING; 176299.Atu4848; -.
DR   EnsemblBacteria; AAK88601; AAK88601; Atu4848.
DR   GeneID; 1136722; -.
DR   KEGG; atu:Atu4848; -.
DR   PATRIC; 20819118; VBIAgrTum91616_4654.
DR   eggNOG; COG0274; -.
DR   HOGENOM; HOG000241644; -.
DR   KO; K01619; -.
DR   OMA; ETMCEEI; -.
DR   OrthoDB; EOG6QZMW5; -.
DR   ProtClustDB; CLSK864118; -.
DR   BioCyc; AGRO:ATU4848-MONOMER; -.
DR   UniPathway; UPA00002; UER00468.
DR   GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR   GO; GO:0004139; F:deoxyribose-phosphate aldolase activity; IEA:InterPro.
DR   GO; GO:0009264; P:deoxyribonucleotide catabolic process; IEA:InterPro.
DR   GO; GO:0046386; P:deoxyribose phosphate catabolic process; IEA:UniProtKB-UniPathway.
DR   Gene3D; 3.20.20.70; -; 1.
DR   InterPro; IPR013785; Aldolase_TIM.
DR   InterPro; IPR011343; DeoC.
DR   InterPro; IPR002915; DeoC/FbaB/lacD_aldolase.
DR   PANTHER; PTHR10889; PTHR10889; 1.
DR   Pfam; PF01791; DeoC; 1.
DR   PIRSF; PIRSF001357; DeoC; 1.
DR   TIGRFAMs; TIGR00126; deoC; 1.
PE   3: Inferred from homology;
KW   Complete proteome; Cytoplasm; Lyase; Reference proteome; Schiff base.
SQ   SEQUENCE   319 AA;  34799 MW;  73940A2005606596 CRC64;
     MSEAFPRNNG TALKPEWFDD VSVNRSASER RAATITTRRS VKKEYQVAWQ IKAITCIDLT
     TLSGDDTPGR VRRLCAKARR PVREDILETL GLADAGITTG AVCVYPTMVP HAVKALEGTA
     IPVASVATGF PSGLTPLPQR LAEIRYAVEQ GAKEIDIVIT REFVLTQNWT ALYDEISAMR
     EACGDAHMKA ILATGDLNTL TNVYRASMVA MQAGSDFIKT STGKEEVNAT LPVSLTMVRA
     LRDYGELTGQ MVGFKPAGGL KTAKDAVSWL TLMKEELGNR WLEPDLFRIG ASSMLGDIER
     QLEHFVTGRY SSAHHHAAA
//
DBGET integrated database retrieval system