ID Q84LK6_ORYSJ Unreviewed; 1017 AA.
AC Q84LK6;
DT 01-JUN-2003, integrated into UniProtKB/TrEMBL.
DT 01-JUN-2003, sequence version 1.
DT 24-JAN-2024, entry version 131.
DE RecName: Full=DNA-directed RNA polymerase {ECO:0000256|ARBA:ARBA00012418, ECO:0000256|RuleBase:RU003805};
DE EC=2.7.7.6 {ECO:0000256|ARBA:ARBA00012418, ECO:0000256|RuleBase:RU003805};
GN Name=rpoT1 {ECO:0000313|EMBL:BAC76604.1};
OS Oryza sativa subsp. japonica (Rice).
OG Mitochondrion {ECO:0000313|EMBL:BAC98395.1}.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX NCBI_TaxID=39947 {ECO:0000313|EMBL:BAC76604.1};
RN [1] {ECO:0000313|EMBL:BAC76604.1}
RP NUCLEOTIDE SEQUENCE.
RA Asayama M.;
RT "Nuclear-encoded gene of T3/T7 bacteriophage-like RNA polymerase in rice.";
RL Submitted (NOV-2002) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:BAC98395.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Leaf {ECO:0000313|EMBL:BAC98395.1};
RX PubMed=15509842; DOI=10.1093/pcp/pch133;
RA Kusumi K., Yara A., Mitsui N., Tozawa Y., Iba K.;
RT "Characterization of a rice nuclear-encoded plastid RNA polymerase gene
RT OsRpoTp.";
RL Plant Cell Physiol. 45:1194-1201(2004).
CC -!- FUNCTION: DNA-dependent RNA polymerase catalyzes the transcription of
CC DNA into RNA using the four ribonucleoside triphosphates as substrates.
CC {ECO:0000256|RuleBase:RU003805}.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=a ribonucleoside 5'-triphosphate + RNA(n) = diphosphate +
CC RNA(n+1); Xref=Rhea:RHEA:21248, Rhea:RHEA-COMP:14527, Rhea:RHEA-
CC COMP:17342, ChEBI:CHEBI:33019, ChEBI:CHEBI:61557, ChEBI:CHEBI:140395;
CC EC=2.7.7.6; Evidence={ECO:0000256|ARBA:ARBA00024550,
CC ECO:0000256|RuleBase:RU003805};
CC -!- SIMILARITY: Belongs to the phage and mitochondrial RNA polymerase
CC family. {ECO:0000256|ARBA:ARBA00009493, ECO:0000256|RuleBase:RU003805}.
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DR EMBL; AB096014; BAC76604.1; -; mRNA.
DR EMBL; AB120431; BAC98395.1; -; mRNA.
DR RefSeq; XP_015612354.1; XM_015756868.1.
DR AlphaFoldDB; Q84LK6; -.
DR SMR; Q84LK6; -.
DR EnsemblPlants; Os09t0246200-03; Os09t0246200-03; Os09g0246200.
DR GeneID; 4346491; -.
DR Gramene; Os09t0246200-03; Os09t0246200-03; Os09g0246200.
DR KEGG; osa:4346491; -.
DR OrthoDB; 143789at2759; -.
DR GO; GO:0000428; C:DNA-directed RNA polymerase complex; IEA:UniProtKB-KW.
DR GO; GO:0005739; C:mitochondrion; IEA:UniProtKB-KW.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0003899; F:DNA-directed 5'-3' RNA polymerase activity; IEA:UniProtKB-EC.
DR GO; GO:0006351; P:DNA-templated transcription; IEA:InterPro.
DR Gene3D; 1.10.287.260; -; 1.
DR Gene3D; 1.10.287.280; -; 1.
DR Gene3D; 1.10.150.20; 5' to 3' exonuclease, C-terminal subdomain; 1.
DR Gene3D; 1.10.1320.10; DNA-directed RNA polymerase, N-terminal domain; 1.
DR InterPro; IPR024075; DNA-dir_RNA_pol_helix_hairp_sf.
DR InterPro; IPR046950; DNA-dir_Rpol_C_phage-type.
DR InterPro; IPR002092; DNA-dir_Rpol_phage-type.
DR InterPro; IPR043502; DNA/RNA_pol_sf.
DR InterPro; IPR037159; RNA_POL_N_sf.
DR InterPro; IPR029262; RPOL_N.
DR PANTHER; PTHR10102; DNA-DIRECTED RNA POLYMERASE, MITOCHONDRIAL; 1.
DR PANTHER; PTHR10102:SF0; DNA-DIRECTED RNA POLYMERASE, MITOCHONDRIAL; 1.
DR Pfam; PF00940; RNA_pol; 1.
DR Pfam; PF14700; RPOL_N; 1.
DR SMART; SM01311; RPOL_N; 1.
DR SUPFAM; SSF56672; DNA/RNA polymerases; 1.
DR PROSITE; PS00900; RNA_POL_PHAGE_1; 1.
DR PROSITE; PS00489; RNA_POL_PHAGE_2; 1.
PE 2: Evidence at transcript level;
KW DNA-directed RNA polymerase {ECO:0000256|ARBA:ARBA00022478,
KW ECO:0000256|RuleBase:RU003805};
KW Mitochondrion {ECO:0000313|EMBL:BAC98395.1};
KW Nucleotidyltransferase {ECO:0000256|RuleBase:RU003805};
KW Transcription {ECO:0000256|RuleBase:RU003805};
KW Transferase {ECO:0000256|RuleBase:RU003805}.
FT DOMAIN 182..503
FT /note="DNA-directed RNA polymerase N-terminal"
FT /evidence="ECO:0000259|SMART:SM01311"
FT REGION 112..162
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 310..330
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1017 AA; 114198 MW; 7C39446A9403E5ED CRC64;
MPSSPTPATA PISCSPSPPL HLHLTARRQT LAPPMWRRLP ARRLASALLS SSAPLPHPLH
RSLLLLLPAA SQRLAPSQTL PRFASSSAAV AAESVSSEEV DELHHAIGEI ARGDPSVSAP
APAAGQEGHR RRSGRGKHSA EAMAVPAAGQ EGHRRRSGRG KHSAEAMAVH GVGYHKYAML
RRRQIQIETE AWEQAAEEYR ELLADMCQQK LAPNLPYVKS LFLGWFEPLR DQIIAEQELV
GERGARASHA RYFNMLPADM MAVITMHKLM GLLMTGSGDG SVRVIQAACQ IGEAIEHEVR
IHKFLEKTKK KSNKEMDNEE EGGDSDIAKE QERLRKKVTD LMKKQKIRQV RNIVKKQDNS
KPWGQDAHAK VGSRLIELMI ETAYIQPPAS QSADGPPDIR PAFTHEMRTV AREQQKSSRR
YGVIKCDPLV RQGLDRTAKH MVIPYMPMLI PPISWTGYDK GAHLFLPSYV MRTHGARQQR
DAVRRAPREQ MQSVFEALNT LGSTKWRVNK RVLSIVDRIW SSGGRLADLV DRTDVALPEK
PDTEDEDKLK KWRWTLRAAK KENSERHSQR CDVELKLAVA RKMKDEDGFY YPHNLDFRGR
AYPMHPYLNH LGSDLCRGVL EFAEGRPLGK SGLRWLKIHL ANLYAGGVDK LSYDGRIAFT
ENHLEDIFDS ADRPLEGKRW WLGAEDPFQC LAVCINLTEA LRSPSPETMI SHIPVHQDGS
CNGLQHYAAL GRDKLGAIAV NLVAGEKPAD VYTGIATRVV EIMKNDALKD PATDPDAARA
RLLLDQVDRK LVKQTVMTSV YGVTYVGARE QIKRRLKERD MICDDSELFS ASCYAAKVTL
TALGEMFQAA RSIMNWLGDC AKVIACENEP VRWTTPLGLP VVQPYRKLGR HLIKTSLQVL
TLQRETDKVM VKRQRTAFPP NFVHSLDGSH MMMTAVACKR QGLNFAGVHD SYWTHACDVD
TMNKILREKF VELYDTPILE NLLESFEKSF PELKFPPLPE RGDFDLTDVL GSPYFFN
//
