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Database: UniProt/TrEMBL
Entry: Q92M95_RHIME
LinkDB: Q92M95_RHIME
Original site: Q92M95_RHIME 
ID   Q92M95_RHIME            Unreviewed;       865 AA.
AC   Q92M95;
DT   01-DEC-2001, integrated into UniProtKB/TrEMBL.
DT   01-DEC-2001, sequence version 1.
DT   07-JUN-2017, entry version 98.
DE   SubName: Full=Probable ATP-dependent DNA ligase {ECO:0000313|EMBL:CAC47322.1};
DE            EC=6.5.1.1 {ECO:0000313|EMBL:CAC47322.1};
GN   ORFNames=SMc03959 {ECO:0000313|EMBL:CAC47322.1};
OS   Rhizobium meliloti (strain 1021) (Ensifer meliloti) (Sinorhizobium
OS   meliloti).
OC   Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales;
OC   Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.
OX   NCBI_TaxID=266834 {ECO:0000313|EMBL:CAC47322.1, ECO:0000313|Proteomes:UP000001976};
RN   [1] {ECO:0000313|EMBL:CAC47322.1, ECO:0000313|Proteomes:UP000001976}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=1021 {ECO:0000313|EMBL:CAC47322.1,
RC   ECO:0000313|Proteomes:UP000001976};
RX   PubMed=11481430; DOI=10.1073/pnas.161294398;
RA   Capela D., Barloy-Hubler F., Gouzy J., Bothe G., Ampe F., Batut J.,
RA   Boistard P., Becker A., Boutry M., Cadieu E., Dreano S., Gloux S.,
RA   Godrie T., Goffeau A., Kahn D., Kiss E., Lelaure V., Masuy D.,
RA   Pohl T., Portetelle D., Puehler A., Purnelle B., Ramsperger U.,
RA   Renard C., Thebault P., Vandenbol M., Weidner S., Galibert F.;
RT   "Analysis of the chromosome sequence of the legume symbiont
RT   Sinorhizobium meliloti strain 1021.";
RL   Proc. Natl. Acad. Sci. U.S.A. 98:9877-9882(2001).
RN   [2] {ECO:0000313|Proteomes:UP000001976}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=1021 {ECO:0000313|Proteomes:UP000001976};
RX   PubMed=11474104; DOI=10.1126/science.1060966;
RA   Galibert F., Finan T.M., Long S.R., Puehler A., Abola P., Ampe F.,
RA   Barloy-Hubler F., Barnett M.J., Becker A., Boistard P., Bothe G.,
RA   Boutry M., Bowser L., Buhrmester J., Cadieu E., Capela D., Chain P.,
RA   Cowie A., Davis R.W., Dreano S., Federspiel N.A., Fisher R.F.,
RA   Gloux S., Godrie T., Goffeau A., Golding B., Gouzy J., Gurjal M.,
RA   Hernandez-Lucas I., Hong A., Huizar L., Hyman R.W., Jones T., Kahn D.,
RA   Kahn M.L., Kalman S., Keating D.H., Kiss E., Komp C., Lelaure V.,
RA   Masuy D., Palm C., Peck M.C., Pohl T.M., Portetelle D., Purnelle B.,
RA   Ramsperger U., Surzycki R., Thebault P., Vandenbol M.,
RA   Vorhoelter F.J., Weidner S., Wells D.H., Wong K., Yeh K.-C., Batut J.;
RT   "The composite genome of the legume symbiont Sinorhizobium meliloti.";
RL   Science 293:668-672(2001).
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DR   EMBL; AL591688; CAC47322.1; -; Genomic_DNA.
DR   RefSeq; NP_386849.1; NC_003047.1.
DR   RefSeq; WP_010970164.1; NC_003047.1.
DR   ProteinModelPortal; Q92M95; -.
DR   STRING; 266834.SMc03959; -.
DR   EnsemblBacteria; CAC47322; CAC47322; SMc03959.
DR   GeneID; 1234419; -.
DR   KEGG; sme:SMc03959; -.
DR   PATRIC; fig|266834.11.peg.4252; -.
DR   eggNOG; ENOG4105DQE; Bacteria.
DR   eggNOG; COG3285; LUCA.
DR   HOGENOM; HOG000222509; -.
DR   KO; K01971; -.
DR   OMA; QEFVICG; -.
DR   BioCyc; SMEL266834:GJF6-2806-MONOMER; -.
DR   Proteomes; UP000001976; Chromosome.
DR   GO; GO:0005524; F:ATP binding; IEA:InterPro.
DR   GO; GO:0003910; F:DNA ligase (ATP) activity; IEA:UniProtKB-EC.
DR   GO; GO:0006310; P:DNA recombination; IEA:InterPro.
DR   GO; GO:0006281; P:DNA repair; IEA:InterPro.
DR   CDD; cd04862; PaeLigD_Pol_like; 1.
DR   InterPro; IPR012309; DNA_ligase_ATP-dep_C.
DR   InterPro; IPR012310; DNA_ligase_ATP-dep_cent.
DR   InterPro; IPR014146; LigD_ligase_dom.
DR   InterPro; IPR014144; LigD_PE_domain.
DR   InterPro; IPR014145; LigD_pol_dom.
DR   InterPro; IPR012340; NA-bd_OB-fold.
DR   InterPro; IPR014143; NHEJ_ligase_prk.
DR   InterPro; IPR033651; PaeLigD_Pol-like.
DR   Pfam; PF04679; DNA_ligase_A_C; 1.
DR   Pfam; PF01068; DNA_ligase_A_M; 1.
DR   Pfam; PF13298; LigD_N; 1.
DR   SUPFAM; SSF50249; SSF50249; 1.
DR   TIGRFAMs; TIGR02777; LigD_PE_dom; 1.
DR   TIGRFAMs; TIGR02778; ligD_pol; 1.
DR   TIGRFAMs; TIGR02779; NHEJ_ligase_lig; 1.
DR   TIGRFAMs; TIGR02776; NHEJ_ligase_prk; 1.
DR   PROSITE; PS50160; DNA_LIGASE_A3; 1.
PE   4: Predicted;
KW   Complete proteome {ECO:0000313|Proteomes:UP000001976};
KW   Ligase {ECO:0000313|EMBL:CAC47322.1};
KW   Reference proteome {ECO:0000313|Proteomes:UP000001976}.
FT   DOMAIN      329    453       DNA_LIGASE_A3. {ECO:0000259|PROSITE:
FT                                PS50160}.
SQ   SEQUENCE   865 AA;  95261 MW;  A1F873AAB0EEAE40 CRC64;
     MAARNEPLSE YNRRRDFTRT SEPKGAVARR SGDNRMRFLV QKHAATRLHY DFRLEWEGVL
     KSWAVTRGPS LNPEDKRLAV RTEDHPLAYG DFEGTIPKGE YGGGTVMLWD TGWWEPEDDP
     SKALKKGKLS FKLHGSRMKG GWALVRMRPR EGEKRENWLL VKETDDVASD DGESLINENI
     TSIVTGRTME EIAEGRGEKR ARVWHSNKSI SANLKAGAIA ENGNAGKRAT RKASGKLPAF
     KAPQLATLVT KVPAGDAWLN EAKFDGYRLV CAVGAGTVRC YTRNGLDWTE KFPAIAAALA
     ELDCQSALID GEVVALSEGG STFSALQKAL RTGASTRLYA FDLIELDGKD LSRKPLVERK
     ERLEALLQTL GATSTVQFSE HVRGNGEHVL SAICKAGQEG IIAKEADAPY RSGRSRSWLK
     VKCTKRQEFV IGGYTPSSKK GRAFASLLVG TFEGGKLIYR GGVGTGFSGK TMEDLAAAFA
     KRKRDTSPFD SVPRERMRNS VWLEPDLVAE VDFAEFTADG HVRHGSFEGL REDKEARAVK
     LETPKPAEAE PETAKSKSSA RTRKTPPVQG DADVLGIRIS HPDRVLFEGQ GITKIDLARY
     YAVVAERMLP FAADHPVSLV RCPQGGERHC FFQKHASDGF PEAIREVPIT ESSGDTENYM
     YIHDAKGLVA AVQMGTLEFH IWGSSIDRLE KPDRLVFDLD PDPSVDFETV KAAALRLRDE
     LAEIGLKTVP MVTGGKGVHV IVPLRPHAEW EEAKGFAKAL ARSIAERDPD NFVATMSKAK
     RKGKIFIDWL RNDRGATAIA PYSTRARSGG PVATPVGWDE LQGLEAANGF QIPDIIERIE
     AGTDPWREIG KISQSLTKKI LNSVE
//
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