ID Q9ZC15_STRCO Unreviewed; 319 AA.
AC Q9ZC15;
DT 01-MAY-1999, integrated into UniProtKB/TrEMBL.
DT 01-MAY-1999, sequence version 1.
DT 27-MAR-2024, entry version 94.
DE RecName: Full=DNA ligase D polymerase domain-containing protein {ECO:0000259|Pfam:PF21686};
GN OrderedLocusNames=SCO6498 {ECO:0000313|EMBL:CAA22035.1};
GN ORFNames=SC1E6.07 {ECO:0000313|EMBL:CAA22035.1};
OS Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145).
OC Bacteria; Actinomycetota; Actinomycetes; Kitasatosporales;
OC Streptomycetaceae; Streptomyces; Streptomyces albidoflavus group.
OX NCBI_TaxID=100226 {ECO:0000313|EMBL:CAA22035.1, ECO:0000313|Proteomes:UP000001973};
RN [1] {ECO:0000313|EMBL:CAA22035.1, ECO:0000313|Proteomes:UP000001973}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC BAA-471 / A3(2) / M145
RC {ECO:0000313|Proteomes:UP000001973};
RX PubMed=12000953; DOI=10.1038/417141a;
RA Bentley S.D., Chater K.F., Cerdeno-Tarraga A.M., Challis G.L.,
RA Thomson N.R., James K.D., Harris D.E., Quail M.A., Kieser H., Harper D.,
RA Bateman A., Brown S., Chandra G., Chen C.W., Collins M., Cronin A.,
RA Fraser A., Goble A., Hidalgo J., Hornsby T., Howarth S., Huang C.H.,
RA Kieser T., Larke L., Murphy L., Oliver K., O'Neil S., Rabbinowitsch E.,
RA Rajandream M.A., Rutherford K., Rutter S., Seeger K., Saunders D.,
RA Sharp S., Squares R., Squares S., Taylor K., Warren T., Wietzorrek A.,
RA Woodward J., Barrell B.G., Parkhill J., Hopwood D.A.;
RT "Complete genome sequence of the model actinomycete Streptomyces coelicolor
RT A3(2).";
RL Nature 417:141-147(2002).
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DR EMBL; AL939128; CAA22035.1; -; Genomic_DNA.
DR PIR; T34728; T34728.
DR RefSeq; NP_630580.1; NC_003888.3.
DR AlphaFoldDB; Q9ZC15; -.
DR STRING; 100226.gene:17764155; -.
DR PaxDb; 100226-SCO6498; -.
DR PATRIC; fig|100226.15.peg.6599; -.
DR eggNOG; COG3285; Bacteria.
DR HOGENOM; CLU_008325_1_1_11; -.
DR InParanoid; Q9ZC15; -.
DR OrthoDB; 4296267at2; -.
DR PhylomeDB; Q9ZC15; -.
DR Proteomes; UP000001973; Chromosome.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0016874; F:ligase activity; IEA:UniProtKB-KW.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.
DR GO; GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
DR CDD; cd04864; LigD_Pol_like_1; 1.
DR Gene3D; 3.90.920.10; DNA primase, PRIM domain; 1.
DR InterPro; IPR014145; LigD_pol_dom.
DR NCBIfam; TIGR02778; ligD_pol; 1.
DR PANTHER; PTHR42705; BIFUNCTIONAL NON-HOMOLOGOUS END JOINING PROTEIN LIGD; 1.
DR PANTHER; PTHR42705:SF2; MULTIFUNCTIONAL NON-HOMOLOGOUS END JOINING DNA REPAIR PROTEIN LIGD; 1.
DR Pfam; PF21686; LigD_Prim-Pol; 1.
PE 4: Predicted;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW DNA damage {ECO:0000256|ARBA:ARBA00022763};
KW DNA recombination {ECO:0000256|ARBA:ARBA00023172};
KW DNA repair {ECO:0000256|ARBA:ARBA00023204};
KW Ligase {ECO:0000256|ARBA:ARBA00022598};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Reference proteome {ECO:0000313|Proteomes:UP000001973}.
FT DOMAIN 47..293
FT /note="DNA ligase D polymerase"
FT /evidence="ECO:0000259|Pfam:PF21686"
SQ SEQUENCE 319 AA; 34919 MW; B586E8DF3336DEC1 CRC64;
MTGSGGTGGG GRGGGARTVR AGRHTVEVHR PDKVLFPVGE GGTEEYTKGD LVDYHRAAAP
FMLPHLRGRP LMLERHPDGV DGPRFMQKNT PEHYPEWIDR VEVGKEGGTV CHTVCDDSAT
LVYLADQAAL TLHRWLSRTG RLDRPDRMVF DLDPAQDDFE AVRAAARLLA GLLDELKLPS
APMTTGSRGL HVVVPLDGRQ DFDDVREFAR AVADVLAAAH PDRLTTAARK KDRGDRLYLD
IQRNAYAQTA VAPLTVRARP GAPVATPISW DQLDDPALHA RRWTVADAVE QARTRPWAGI
MNSPRALGPA RRRLNALHG
//
