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Database: UniProt/TrEMBL
Entry: R4SZV3_AMYOR
LinkDB: R4SZV3_AMYOR
Original site: R4SZV3_AMYOR 
ID   R4SZV3_AMYOR            Unreviewed;       678 AA.
AC   R4SZV3;
DT   24-JUL-2013, integrated into UniProtKB/TrEMBL.
DT   24-JUL-2013, sequence version 1.
DT   20-DEC-2017, entry version 24.
DE   SubName: Full=DNA ligase (ATP) {ECO:0000313|EMBL:AGM08100.1};
GN   Name=lig {ECO:0000313|EMBL:AGM08100.1};
GN   ORFNames=AORI_5517 {ECO:0000313|EMBL:AGM08100.1};
OS   Amycolatopsis orientalis HCCB10007.
OC   Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae;
OC   Amycolatopsis.
OX   NCBI_TaxID=1156913 {ECO:0000313|EMBL:AGM08100.1, ECO:0000313|Proteomes:UP000013968};
RN   [1] {ECO:0000313|EMBL:AGM08100.1, ECO:0000313|Proteomes:UP000013968}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=HCCB10007 {ECO:0000313|EMBL:AGM08100.1};
RX   PubMed=23627759; DOI=10.1186/1471-2164-14-289;
RA   Tang B., Wang Q., Yang M., Xie F., Zhu Y., Zhuo Y., Wang S., Gao H.,
RA   Ding X., Zhang L., Zhao G., Zheng H.;
RT   "ContigScape: a Cytoscape plugin facilitating microbial genome gap
RT   closing.";
RL   BMC Genomics 14:289-289(2013).
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DR   EMBL; CP003410; AGM08100.1; -; Genomic_DNA.
DR   RefSeq; WP_016335840.1; NC_021252.1.
DR   EnsemblBacteria; AGM08100; AGM08100; AORI_5517.
DR   KEGG; aoi:AORI_5517; -.
DR   PATRIC; fig|1156913.3.peg.5626; -.
DR   KO; K01971; -.
DR   OrthoDB; POG091H0AZ9; -.
DR   Proteomes; UP000013968; Chromosome.
DR   GO; GO:0005524; F:ATP binding; IEA:InterPro.
DR   GO; GO:0003910; F:DNA ligase (ATP) activity; IEA:InterPro.
DR   GO; GO:0006310; P:DNA recombination; IEA:InterPro.
DR   GO; GO:0006281; P:DNA repair; IEA:InterPro.
DR   CDD; cd04863; MtLigD_Pol_like; 1.
DR   InterPro; IPR012309; DNA_ligase_ATP-dep_C.
DR   InterPro; IPR012310; DNA_ligase_ATP-dep_cent.
DR   InterPro; IPR014146; LigD_ligase_dom.
DR   InterPro; IPR014145; LigD_pol_dom.
DR   InterPro; IPR033649; MtLigD_Pol-like.
DR   InterPro; IPR012340; NA-bd_OB-fold.
DR   InterPro; IPR014143; NHEJ_ligase_prk.
DR   Pfam; PF04679; DNA_ligase_A_C; 1.
DR   Pfam; PF01068; DNA_ligase_A_M; 1.
DR   SUPFAM; SSF50249; SSF50249; 1.
DR   TIGRFAMs; TIGR02778; ligD_pol; 1.
DR   TIGRFAMs; TIGR02779; NHEJ_ligase_lig; 1.
DR   TIGRFAMs; TIGR02776; NHEJ_ligase_prk; 1.
DR   PROSITE; PS50160; DNA_LIGASE_A3; 1.
PE   4: Predicted;
KW   Coiled coil {ECO:0000256|SAM:Coils};
KW   Complete proteome {ECO:0000313|Proteomes:UP000013968};
KW   Ligase {ECO:0000313|EMBL:AGM08100.1};
KW   Reference proteome {ECO:0000313|Proteomes:UP000013968}.
FT   DOMAIN      121    253       DNA_LIGASE_A3. {ECO:0000259|PROSITE:
FT                                PS50160}.
FT   COILED      267    287       {ECO:0000256|SAM:Coils}.
SQ   SEQUENCE   678 AA;  74511 MW;  F04EA6700B2FB4A6 CRC64;
     MAREAVRGVP GWVSPMLASP DGGRLREGPE WAYEYKLDGY RACMRIAADG TTVLTSRNDV
     DFTDEFLDLT GVLTEALEGR SAVLDGEIVV YNDAGQIDFG LLQERRGRYQ THRGSARRDE
     PFADDVPVRF LAFDLVQLGG VSLLREPYDE RRRQLTALPM PDPYRVEVVR GFTFTDLAAD
     RRTPWHLLDH VKASGHEGLV AKLRTAAYTP GRRSNAWLKH PLIQTAEVIV CGYRPGQGRL
     DGLMGGLLLG AHDPDTGDLV YIGDVGTGFT EAERARLQAR LDALERKRHP FAETPPRADT
     ARAQWVEPEL VGEVVFRQFT RGAGRLRHTA WRGLRDDKEP ADVLAPQRRE PASARKTTRE
     QAQGDPVAED QPTASPGAKI TVQAGDRRLV LSNLDKPLYP DGFTKGEVIN YYSRIAPVLL
     PHLAGRPVTF IRFPDGVGGE QFFEKNVPHG APAWLPTARI ARSGSRGSTE PVTYALLDEL
     AAVVWAANMA ALELHVPQWT VGDDGTRRPP DRLVFDLDPG PGTSIVHCCR VAERLHEALT
     DNGLTPLAKT SGSKGMQLYC AITTDDPAAP SAYAKKLAQR LARETPGKVT AVMAKAQRTG
     RVFIDWSQNN PAKTTVAPYS LRGRDHPTVS TPVTWDEVRA CRRPAQLVFT ADDVLDRVNE
     HGDLLAGLDV TRAPLPSG
//
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