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Database: UniProt/TrEMBL
Entry: S5ITW1_VIBPH
LinkDB: S5ITW1_VIBPH
Original site: S5ITW1_VIBPH 
ID   S5ITW1_VIBPH            Unreviewed;       507 AA.
AC   S5ITW1;
DT   16-OCT-2013, integrated into UniProtKB/TrEMBL.
DT   16-OCT-2013, sequence version 1.
DT   28-FEB-2018, entry version 22.
DE   SubName: Full=Cytochrome C oxidase subunit II {ECO:0000313|EMBL:AGQ93587.1};
GN   ORFNames=M634_22905 {ECO:0000313|EMBL:AGQ93587.1};
OS   Vibrio parahaemolyticus O1:Kuk str. FDA_R31.
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales;
OC   Vibrionaceae; Vibrio.
OX   NCBI_TaxID=1338034 {ECO:0000313|EMBL:AGQ93587.1, ECO:0000313|Proteomes:UP000014929};
RN   [1] {ECO:0000313|EMBL:AGQ93587.1, ECO:0000313|Proteomes:UP000014929}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=FDA_R31 {ECO:0000313|EMBL:AGQ93587.1};
RX   PubMed=25814612;
RA   Ludeke C.H., Kong N., Weimer B.C., Fischer M., Jones J.L.;
RT   "Complete Genome Sequences of a Clinical Isolate and an Environmental
RT   Isolate of Vibrio parahaemolyticus.";
RL   Genome Announc. 3:0-0(2015).
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DR   EMBL; CP006005; AGQ93587.1; -; Genomic_DNA.
DR   RefSeq; WP_020842191.1; NC_021821.1.
DR   EnsemblBacteria; AGQ93587; AGQ93587; M634_22905.
DR   KEGG; vpf:M634_22905; -.
DR   KO; K01176; -.
DR   BioCyc; VPAR1338034-WGS:GSYU-34963-MONOMER; -.
DR   Proteomes; UP000014929; Chromosome II.
DR   GO; GO:0005509; F:calcium ion binding; IEA:InterPro.
DR   GO; GO:0004553; F:hydrolase activity, hydrolyzing O-glycosyl compounds; IEA:InterPro.
DR   GO; GO:0005975; P:carbohydrate metabolic process; IEA:InterPro.
DR   Gene3D; 2.60.40.1180; -; 1.
DR   InterPro; IPR013776; A-amylase_thermo.
DR   InterPro; IPR006047; Glyco_hydro_13_cat_dom.
DR   InterPro; IPR013780; Glyco_hydro_b.
DR   InterPro; IPR017853; Glycoside_hydrolase_SF.
DR   Pfam; PF00128; Alpha-amylase; 1.
DR   PIRSF; PIRSF001021; Alph-amls_thrmst; 1.
DR   SMART; SM00642; Aamy; 1.
DR   SUPFAM; SSF51445; SSF51445; 1.
PE   4: Predicted;
KW   Calcium {ECO:0000256|PIRSR:PIRSR001021-2};
KW   Complete proteome {ECO:0000313|Proteomes:UP000014929};
KW   Metal-binding {ECO:0000256|PIRSR:PIRSR001021-2};
KW   Signal {ECO:0000256|SAM:SignalP}.
FT   SIGNAL        1     23       {ECO:0000256|SAM:SignalP}.
FT   CHAIN        24    507       {ECO:0000256|SAM:SignalP}.
FT                                /FTId=PRO_5004537544.
FT   DOMAIN       27    417       Aamy. {ECO:0000259|SMART:SM00642}.
FT   ACT_SITE    255    255       Nucleophile. {ECO:0000256|PIRSR:
FT                                PIRSR001021-1}.
FT   ACT_SITE    285    285       Proton donor. {ECO:0000256|PIRSR:
FT                                PIRSR001021-1}.
FT   METAL       127    127       Calcium 1. {ECO:0000256|PIRSR:
FT                                PIRSR001021-2}.
FT   METAL       183    183       Calcium 2. {ECO:0000256|PIRSR:
FT                                PIRSR001021-2}.
FT   METAL       205    205       Calcium 2; via carbonyl oxygen.
FT                                {ECO:0000256|PIRSR:PIRSR001021-2}.
FT   METAL       207    207       Calcium 2. {ECO:0000256|PIRSR:
FT                                PIRSR001021-2}.
FT   METAL       218    218       Calcium 1. {ECO:0000256|PIRSR:
FT                                PIRSR001021-2}.
FT   METAL       224    224       Calcium 1. {ECO:0000256|PIRSR:
FT                                PIRSR001021-2}.
FT   METAL       226    226       Calcium 2. {ECO:0000256|PIRSR:
FT                                PIRSR001021-2}.
FT   METAL       259    259       Calcium 1; via carbonyl oxygen.
FT                                {ECO:0000256|PIRSR:PIRSR001021-2}.
FT   METAL       324    324       Calcium 3; via carbonyl oxygen.
FT                                {ECO:0000256|PIRSR:PIRSR001021-2}.
FT   METAL       433    433       Calcium 3. {ECO:0000256|PIRSR:
FT                                PIRSR001021-2}.
FT   METAL       455    455       Calcium 3. {ECO:0000256|PIRSR:
FT                                PIRSR001021-2}.
SQ   SEQUENCE   507 AA;  58384 MW;  8B1EF35914AA60AC CRC64;
     MKTFKLKRTF LPLALLLSAP AFAGQNGTMM QYFHWYVPND GALWTQVESN APALAENGFT
     ALWLPPAYKG AGGSNDVGYG VYDMYDLGEF DQKGSVRTKY GTKAQYISAI NAAHNNNIQI
     YGDVVFNHRG GADGKSWVDT KRVDWDNRNI ELGDKWIEAW VEFNFPGRND KYSNFHWTWY
     HFDGVDWDDA GKEKAIFKFK GEGKAWDWEV SSEKGNYDYL MYADLDMDHP EVKQELKDWG
     EWYINMTGVD GFRMDAVKHI KYQYLQEWID HLRWKTGKEL FTVGEYWNYD VNQLHNFITK
     TSGSMSLFDA PLHMNFYNAS KSGGNYDMRQ IMNGTLMKDN PVKAVTLVEN HDTQPLQALE
     STVDWWFKPL AYAFILLREE GYPSVFYADY YGAQYSDKGY NINMAKVPYI EELVTLRKEY
     AYGKQNSYLD HWDVIGWTRE GDAEHPNSMA VIMSDGPGGT KWMYTGKPST RYVDKLGIRT
     EDVWTDANGW AEFPVNGGSV SVWVGVK
//
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