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Database: UniProt/TrEMBL
Entry: S5SBQ2_RHIET
LinkDB: S5SBQ2_RHIET
Original site: S5SBQ2_RHIET 
ID   S5SBQ2_RHIET            Unreviewed;       882 AA.
AC   S5SBQ2;
DT   16-OCT-2013, integrated into UniProtKB/TrEMBL.
DT   16-OCT-2013, sequence version 1.
DT   07-JUN-2017, entry version 21.
DE   SubName: Full=ATP-dependent DNA ligase protein {ECO:0000313|EMBL:AGS24876.1};
DE            EC=6.5.1.1 {ECO:0000313|EMBL:AGS24876.1};
GN   ORFNames=REMIM1_PD00265 {ECO:0000313|EMBL:AGS24876.1};
OS   Rhizobium etli bv. mimosae str. Mim1.
OG   Plasmid pRetMIM1d {ECO:0000313|EMBL:AGS24876.1,
OG   ECO:0000313|Proteomes:UP000015261}.
OC   Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales;
OC   Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.
OX   NCBI_TaxID=1328306 {ECO:0000313|EMBL:AGS24876.1, ECO:0000313|Proteomes:UP000015261};
RN   [1] {ECO:0000313|EMBL:AGS24876.1, ECO:0000313|Proteomes:UP000015261}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=Mim1 {ECO:0000313|EMBL:AGS24876.1,
RC   ECO:0000313|Proteomes:UP000015261};
RC   PLASMID=Plasmid pRetMIM1d {ECO:0000313|Proteomes:UP000015261};
RA   Rogel M.A., Bustos P., Santamaria R.I., Gonzalez V., Romero D.,
RA   Cevallos M.A., Lozano L., Ormeno-Orrillo E., Martinez-Romero E.;
RT   "Genomic basis of Rhizobium etli symbiovar mimosae and its prevalence
RT   among Phaseolus vulgaris nodule bacteria.";
RL   Submitted (MAY-2013) to the EMBL/GenBank/DDBJ databases.
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DR   EMBL; CP005954; AGS24876.1; -; Genomic_DNA.
DR   RefSeq; WP_020923116.1; NC_021908.1.
DR   EnsemblBacteria; AGS24876; AGS24876; REMIM1_PD00265.
DR   KEGG; rel:REMIM1_PD00265; -.
DR   PATRIC; fig|1328306.3.peg.5265; -.
DR   KO; K01971; -.
DR   OrthoDB; POG091H0AZ9; -.
DR   BioCyc; RETL1328306:G13CG-6064-MONOMER; -.
DR   Proteomes; UP000015261; Plasmid pRetMIM1d.
DR   GO; GO:0005524; F:ATP binding; IEA:InterPro.
DR   GO; GO:0003910; F:DNA ligase (ATP) activity; IEA:UniProtKB-EC.
DR   GO; GO:0006310; P:DNA recombination; IEA:InterPro.
DR   GO; GO:0006281; P:DNA repair; IEA:InterPro.
DR   CDD; cd04862; PaeLigD_Pol_like; 1.
DR   InterPro; IPR012309; DNA_ligase_ATP-dep_C.
DR   InterPro; IPR012310; DNA_ligase_ATP-dep_cent.
DR   InterPro; IPR014146; LigD_ligase_dom.
DR   InterPro; IPR014144; LigD_PE_domain.
DR   InterPro; IPR014145; LigD_pol_dom.
DR   InterPro; IPR012340; NA-bd_OB-fold.
DR   InterPro; IPR014143; NHEJ_ligase_prk.
DR   InterPro; IPR033651; PaeLigD_Pol-like.
DR   Pfam; PF04679; DNA_ligase_A_C; 1.
DR   Pfam; PF01068; DNA_ligase_A_M; 1.
DR   Pfam; PF13298; LigD_N; 1.
DR   SUPFAM; SSF50249; SSF50249; 1.
DR   TIGRFAMs; TIGR02777; LigD_PE_dom; 1.
DR   TIGRFAMs; TIGR02778; ligD_pol; 1.
DR   TIGRFAMs; TIGR02779; NHEJ_ligase_lig; 1.
DR   TIGRFAMs; TIGR02776; NHEJ_ligase_prk; 1.
DR   PROSITE; PS50160; DNA_LIGASE_A3; 1.
PE   4: Predicted;
KW   Complete proteome {ECO:0000313|Proteomes:UP000015261};
KW   Ligase {ECO:0000313|EMBL:AGS24876.1};
KW   Plasmid {ECO:0000313|EMBL:AGS24876.1}.
FT   DOMAIN      339    432       DNA_LIGASE_A3. {ECO:0000259|PROSITE:
FT                                PS50160}.
SQ   SEQUENCE   882 AA;  97512 MW;  1DC3D015F555C118 CRC64;
     MASDKLSSYR SKRDFQKTAE PSGERSLKQS NRRRFVIQKH DATRLHYDLR LELDGVFKSW
     AVTKGPSLDP HDKRLAVEVE DHPLDYGDFE GTIPKGQYGG GTVMLWDRGY WKPEGRKSPE
     QALSKGDFKF TLEGERLHGS FVLVRMRNDR ERSKRTNWLL IKHHDEFSVD ENGASILEEN
     VTSVASGRSM EMIAAGKGRK PKPFMVEGGK VQADAVWDSN HGLAAEERQS EASAGKRAGT
     ATAVDLPDFI APQLCEKVER PPGGDGWIHE IKFDGYRIQM RVLDGEVTLK TRKGLDWTAK
     YPEIAEAASG LPDCILDGEI CALDEQGAPN FAALQAALSE GKTASLVYFA FDLLYHGGED
     LRSKPLIERK RRLQELLTEA GNDPRIRYVE HFETGGDAVL RSACKLSLEG IISKQADAPY
     QSGRTESWAK SKCRAGHEVV IGAYAKTNGR FRSLLAGVFR GDHFVYVGRV GTGYGAKKVE
     TLLPKLKALE TARSPFTGIG APKKQAEVVW VKPELVAEIE FEGWTADGLV RQAAFKGLRE
     DKPAREVEAE PPVRPAKADI AEPVPRARQT PARRKGAKAD VMGVLISNPD KPLWPDANGS
     EPVTKEELAG YYEAVGDWMI DHIKGRPCSI IRAPDGIGGE QFFQRHAMPG QSNLLDLVKV
     FGDKKPYLQI DRIEGLAAVA QIAAVELHPW NCEPGQPEVP GRLVFDLDPG PDVPFATVVA
     AAREMRDRLE DLGLISFCKT TGGKGLHVVT PLAVNKRKPL SWPEAKAFAH DVCQQMARNN
     PDLYLIKMTK SLRGGRIFLD YLRNDRMATA VAPLSPRARP GATVSMPLTW TQVKSDLDPK
     RFTIRTVPAL LSKSSAWKDY CEGQRPLEQA IKKLGRAGKH AA
//
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