ID   U5D3F3_AMBTC            Unreviewed;       650 AA.
AC   U5D3F3;
DT   11-DEC-2013, integrated into UniProtKB/TrEMBL.
DT   11-DEC-2013, sequence version 1.
DT   27-MAR-2024, entry version 54.
DE   RecName: Full=RanBP2-type domain-containing protein {ECO:0000259|PROSITE:PS01358};
GN   ORFNames=AMTR_s00175p00021990 {ECO:0000313|EMBL:ERN15947.1};
OS   Amborella trichopoda.
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; Amborellales; Amborellaceae; Amborella.
OX   NCBI_TaxID=13333 {ECO:0000313|EMBL:ERN15947.1, ECO:0000313|Proteomes:UP000017836};
RN   [1] {ECO:0000313|Proteomes:UP000017836}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX   PubMed=24357323;
RG   Amborella Genome Project;
RT   "The Amborella genome and the evolution of flowering plants.";
RL   Science 342:1241089-1241089(2013).
CC   -!- COFACTOR:
CC       Name=Zn(2+); Xref=ChEBI:CHEBI:29105;
CC         Evidence={ECO:0000256|ARBA:ARBA00001947};
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   EMBL; KI392493; ERN15947.1; -; Genomic_DNA.
DR   RefSeq; XP_006854480.1; XM_006854418.2.
DR   AlphaFoldDB; U5D3F3; -.
DR   STRING; 13333.U5D3F3; -.
DR   EnsemblPlants; ERN15947; ERN15947; AMTR_s00175p00021990.
DR   GeneID; 18444255; -.
DR   Gramene; ERN15947; ERN15947; AMTR_s00175p00021990.
DR   KEGG; atr:18444255; -.
DR   eggNOG; KOG1343; Eukaryota.
DR   HOGENOM; CLU_007727_8_6_1; -.
DR   OMA; VCGEHRE; -.
DR   OrthoDB; 124800at2759; -.
DR   Proteomes; UP000017836; Unassembled WGS sequence.
DR   GO; GO:0005737; C:cytoplasm; IBA:GO_Central.
DR   GO; GO:0000118; C:histone deacetylase complex; IBA:GO_Central.
DR   GO; GO:0004407; F:histone deacetylase activity; IBA:GO_Central.
DR   GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR   GO; GO:0000122; P:negative regulation of transcription by RNA polymerase II; IBA:GO_Central.
DR   CDD; cd09992; HDAC_classII; 1.
DR   Gene3D; 3.40.800.20; Histone deacetylase domain; 1.
DR   InterPro; IPR000286; His_deacetylse.
DR   InterPro; IPR023801; His_deacetylse_dom.
DR   InterPro; IPR037138; His_deacetylse_dom_sf.
DR   InterPro; IPR023696; Ureohydrolase_dom_sf.
DR   InterPro; IPR001876; Znf_RanBP2.
DR   PANTHER; PTHR10625:SF16; HISTONE DEACETYLASE 15; 1.
DR   PANTHER; PTHR10625; HISTONE DEACETYLASE HDAC1-RELATED; 1.
DR   Pfam; PF00850; Hist_deacetyl; 1.
DR   PRINTS; PR01270; HDASUPER.
DR   SUPFAM; SSF52768; Arginase/deacetylase; 1.
DR   PROSITE; PS01358; ZF_RANBP2_1; 1.
PE   4: Predicted;
KW   Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW   Reference proteome {ECO:0000313|Proteomes:UP000017836}.
FT   DOMAIN          177..196
FT                   /note="RanBP2-type"
FT                   /evidence="ECO:0000259|PROSITE:PS01358"
SQ   SEQUENCE   650 AA;  71138 MW;  39602FEDCA34BCEC CRC64;
     MVMDSDGVHL RRLNSDCVAK NSLPEETNQD GYMRSAACLH GRCENATHEE IRCGLINVED
     FHQKQQSIER SGSDTAEKIH EYALPSIGSG IRGNGCTPDF SDGICNELGG TSVSVNCDLP
     SFEGSNAPSA HSHLKRHKDG SFQDLINLYN EQDYLEDDDD NDSDWDPFSA SLVNKKWFCI
     NCTMANFDDV LHCDVCGEQR DTNILTDGIF STQGATEVPI ILKPVDVLEE RPASEDITLV
     GFDEGMLLHL EVEKKPHPHP ERPDRLRAIV ANLKTAGIFP GKCFPLPARE ITREELGMVH
     TSEHVEAVES TSFSLSSYFT PDTFANEHSA RAARLAAGLC SDLASTIMSG KAKNGFALVR
     PPGHHAGVHL AMGFCLHNNA AVAALAAQAA GANRVLIVDW DVHHGNGTQE IFEANPSVLY
     ISLHRHEGGR FYPGTGAADE VGSLGAEGYS VNVPWKCGGV GDNDYIFAFQ HIVLPIAKQF
     SPDLTIISAG FDAARGDPLG CCDVTPAGFA QMAHMLNGLS ERRLLVVLEG GYNLRSISSS
     SMAVIKVLLG EHPGCEMDSV VPSKAGLKTI LEVMEIQLKF WPTLEASYMR LRSQWEVSCL
     QNKGKLVKRK RCIVGGPIWW KWGRKRVMYE LLLGRRVVKN KGSSKKALRI
//