KEGG   Trichoderma reesei QM6a: TRIREDRAFT_108548
Entry
TRIREDRAFT_108548 CDS       T02991                                 
Name
(RefSeq) hypothetical protein
  KO
K12597  protein AIR1/2
Organism
tre  Trichoderma reesei QM6a
Pathway
tre03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:tre00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    TRIREDRAFT_108548
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tre03019]
    TRIREDRAFT_108548
   03016 Transfer RNA biogenesis [BR:tre03016]
    TRIREDRAFT_108548
Messenger RNA biogenesis [BR:tre03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    TRAMP complex
     TRIREDRAFT_108548
Transfer RNA biogenesis [BR:tre03016]
 Eukaryotic type
  tRNA degradation factors
   TRAMP complex
    TRIREDRAFT_108548
SSDB
Motif
Pfam: Presenilin
Other DBs
NCBI-GeneID: 18481694
NCBI-ProteinID: XP_006966317
JGI: Trire2_108548
UniProt: G0RLV1
Position
Unknown
AA seq 742 aa
MRTAHRPNPDDFISLLSSEDEAPLNRKRKYSVAEQASAGRNRDSQGRAKRVRTSQVPGDS
ITGAKGLKAGKLEVVEGSDIGIPAFGSHGEKKKTGGFSPDSVFLPKSPPMFTLHSISLQL
PVFAPQREGTWLTRFTEWAQLLCSANRDSPSAAEITPALIRTAYKQYIDIHSRLKSNKKR
AARLVAQQFKDSSLLDLIRAFRPLQNEATVQETLEEGLDATLAGSEIRLDSLRPLALPPQ
SQILSSAAAPPSLLTEQSGALYILDVAPQLPQDATMCETIPASQQGSQPASQLDLLPEPQ
PKHLRQTQHASVKVTMSLPSAVPSGAEALRQQRLYFPSARDPFNMCLLCGAEGHVADKCT
RSCQLCGKKDHWDLCCPLWQANCGKCYRVGHSDEACWYPEEHYWVFCTYCRSAESHLSSD
CMSLYRSFRPGPDTIKKVNTLPVSCAKCGSKKHFHGDCRPNGMPALRCDHRFHLDNMRQY
LDPTSSAGPIIGADACRVAPKAGGFRVYGQVLASPVDNVHYYSGSDDSDEGLHRHPLAHC
RHETVHHIAPRHLHRILCHLVEAEEEEDVVEAAIMVAQVANRDKVVRLLRMSRDVMRNKC
KVANMCRVDKASRLAEAAGVAEVKAAKAGNEVARKVKMDKDIMKALMYTISRVFEKTKTA
QANRMARESEAKRSHDVAEEVQMDTNEAKTDKLHKMSQLIRVIKQAKSTQVNKTARENEL
QDRDDVDRFTKAKMNGAWRTGS
NT seq 2229 nt   +upstreamnt  +downstreamnt
atgaggactgctcatcgaccaaacccggacgatttcatcagcctgctcagcagcgaggat
gaagcgcccttgaacagaaagagaaagtactcggtggcagaacaagccagcgctggtaga
aacagggattctcaaggacgagccaagcgtgttcgaacaagccaagtccctggggatagc
atcaccggggccaaagggctcaaggcgggaaaactcgaggtcgttgaaggctctgatatc
ggaattcccgcatttggctcacatggcgagaagaagaaaactggaggcttctctccggac
agtgtcttcttgcccaagtcgcctccgatgttcaccttgcactcaatctctcttcagctt
cctgtgtttgccccacagagagagggaacatggctcaccagattcaccgagtgggctcag
ctgctctgcagcgccaacagggactcacccagtgctgcggagatcacgcctgccttgatt
cgcaccgcttacaagcaatacattgacatccacagcaggctcaagtccaacaagaagcgg
gctgcccgactggtggcccaacagttcaaggattcgtcactgcttgacctgataagggcc
ttccggccactccagaacgaggctacggtgcaggagactttggaagaaggtttggacgca
actttggccggatccgagatacgacttgactcacttcgcccgctggcgcttccgcctcaa
agccaaatcctctcttctgctgcggcgcctcctagtttgcttacagagcagtccggcgct
ctctatatattagacgtggccccccagcttccccaggacgcaacgatgtgcgagacaata
ccagcatcacagcaaggatcacagccagcatcacagctagacttgcttccagaaccacaa
ccgaagcatcttcgacagacccaacacgcctctgtcaaagtcaccatgtcgctcccatct
gctgtcccttccggcgccgaagccctcaggcagcagcgcctgtatttcccttcggccagg
gaccccttcaacatgtgcttgctctgtggagcagagggccatgttgccgacaagtgcacc
cggtcgtgccaactctgcgggaaaaaagaccactgggacctttgctgcccattatggcag
gccaactgcggaaaatgttatcgggttggccactcggatgaagcctgttggtatcctgag
gaacactactgggttttttgcacatactgcaggtcagccgagagccacttgtcttcggac
tgcatgtcactctacaggtcctttcgtcccggcccagacactatcaagaaggtcaataca
ctgcctgtgtcatgcgccaaatgcgggagtaagaagcatttccacggggactgccgtcca
aatggaatgcccgccctgcgttgtgaccacaggttccacctggacaatatgcgccagtat
ctggacccgacgagcagtgccggccccatcatcggcgcagatgcatgcagagtggctccc
aaggcaggaggtttcagggtctacggccaagtcttggcctcgcctgtcgacaacgtgcac
tactactccggcagcgacgattccgatgaagggcttcatcgccatcccttggctcattgt
cgtcacgagacagttcaccatatcgccccccgacacctccaccgcatcctgtgccatctc
gtcgaggcggaggaggaggaagacgtggtcgaggcggccatcatggtggcccaggtcgcc
aacagggacaaagtggtcaggctgctcaggatgtccagagacgtcatgaggaacaagtgc
aaggtggccaacatgtgcagagtggacaaggcgagcagactggccgaggcggccggcgtg
gcagaggtaaaagcggcaaaagcgggaaacgaggtggccagaaaggtcaagatggacaag
gacatcatgaaggccctgatgtacacaatatccagggtgttcgagaagacgaaaacggcc
caggccaacagaatggccagggaaagcgaggcaaaaagaagccacgacgtggccgaagaa
gttcagatggacaccaatgaggccaagacggacaagttgcacaagatgtcccagctcatc
agggtgatcaagcaggccaagtcgacgcaggtgaacaaaacggccagggaaaacgagcta
caagacagggacgacgtggacagattcaccaaggccaaaatgaacggggcctggaggact
gggtcctaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (37)   
   KEGG ORTHOLOGY (1)   
   RefGene (32)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (46)   

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