KEGG   Trichoderma reesei QM6a: TRIREDRAFT_122392
Entry
TRIREDRAFT_122392 CDS       T02991                                 
Name
(RefSeq) hypothetical protein
  KO
K10755  replication factor C subunit 2/4
Organism
tre  Trichoderma reesei QM6a
Pathway
tre03030  DNA replication
tre03410  Base excision repair
tre03420  Nucleotide excision repair
tre03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:tre00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    TRIREDRAFT_122392
   03410 Base excision repair
    TRIREDRAFT_122392
   03420 Nucleotide excision repair
    TRIREDRAFT_122392
   03430 Mismatch repair
    TRIREDRAFT_122392
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:tre03032]
    TRIREDRAFT_122392
   03036 Chromosome and associated proteins [BR:tre03036]
    TRIREDRAFT_122392
   03400 DNA repair and recombination proteins [BR:tre03400]
    TRIREDRAFT_122392
DNA replication proteins [BR:tre03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    TRIREDRAFT_122392
  DNA Replication Termination Factors
   ELG1-RFC complex
    TRIREDRAFT_122392
Chromosome and associated proteins [BR:tre03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    TRIREDRAFT_122392
DNA repair and recombination proteins [BR:tre03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     TRIREDRAFT_122392
  Check point factors
   HRAD17(Rad24)-RFC complex
    TRIREDRAFT_122392
SSDB
Motif
Pfam: AAA Rep_fac_C DNA_pol3_delta2 Rad17 RuvB_N AAA_22 AAA_11 DNA_pol3_delta AAA_16 Mg_chelatase AAA_assoc_2 AAA_28 AAA_14 AAA_19 SLFN-g3_helicase AAA_7 AAA_24 DUF815 AAA_5 ResIII bpMoxR AAA_18 RNA_helicase AAA_3 DUF5612 AAA_30 AAA_2 Parvo_NS1
Other DBs
NCBI-GeneID: 18483394
NCBI-ProteinID: XP_006966267
JGI: Trire2_122392
UniProt: G0RMA0
Position
Unknown
AA seq 351 aa
MASFFDLKARKAAAANGTSSQKHDKPADVRVQPWVEKYRPKSLDDVTAQDHTVTVLQRTL
QASNLPHMLFYGPPGTGKTSTILALAKELYGPEMIKSRVLELNASDERGISIVRQKVKDF
ARMQLTNPPPHYKDKYPCPPFKIIILDEADSMTQDAQSALRRTMETYSKITRFCLICNYV
TRIIDPLASRCSKFRFKSLDQGNAKKRLESIAEAEGVALEDGAVDTLIKCSEGDLRKAIT
YLQSAARLIVEDIAGVIPDATIGDLVKAMRPRTSGQTYQSISKVVEDLVADGWSAGQLYQ
DLVFDETIPDIQKNKIVLVFSEIDKRLVDGADEHLSILDLAMRIAAILSEK
NT seq 1056 nt   +upstreamnt  +downstreamnt
atggccagcttcttcgacctcaaggccagaaaggccgccgctgcaaacggaacttcatcg
cagaaacacgacaagccggccgacgtgcgagtacagccctgggtcgagaaataccgtccc
aagagcttagacgatgtcacagcgcaagatcacacggtcacggttctccagagaacactg
caagcttcaaatcttccgcacatgctattctacggccctcccggcacgggcaaaacctcg
accatcctggcccttgccaaggagctctacggccccgagatgatcaagtcccgagttctc
gaactcaacgcgtccgacgagcgtggcatatcgatcgttcggcaaaaggtcaaagatttc
gcgcggatgcaattgaccaacccgccgcctcattacaaagacaaatacccctgtccaccg
ttcaagatcatcatcctcgacgaggccgattccatgacacaggatgcccagagcgccctg
agacggacaatggagacgtacagcaaaatcacgcgcttttgtctgatctgcaactacgtc
accagaatcatcgaccccctggccagtagatgtagcaagttccgcttcaagagtctggac
cagggcaacgcaaagaagcggctcgagtcaatagcagaggcagaaggtgtggcgctcgaa
gacggtgctgtggatacactcatcaagtgcagcgagggtgacttgcgaaaggccattact
tatcttcagagtgctgcccgattaattgtcgaggacattgccggtgtgattcctgatgcc
actattggcgatctcgtcaaggctatgcgtcctcgtacatcaggccagacatatcagtcc
atatccaaggtggtcgaggacttggtagcagatggctggagtgccggccagctttaccaa
gatcttgttttcgacgagacaatccccgacattcaaaagaacaagattgtcctcgtcttc
tccgaaatagacaaacgacttgttgacggagcggacgagcatctctcaattctcgatttg
gcaatgcggatagcggccatcttgtctgaaaaatag

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