KEGG   Treponema sp. OMZ 838: JO41_04200
Entry
JO41_04200        CDS       T03454                                 
Name
(GenBank) pseudouridine synthase
  KO
K06180  23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
Organism
trm  Treponema sp. OMZ 838
Brite
KEGG Orthology (KO) [BR:trm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:trm03009]
    JO41_04200
Enzymes [BR:trm01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.23  23S rRNA pseudouridine1911/1915/1917 synthase
     JO41_04200
Ribosome biogenesis [BR:trm03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    JO41_04200
SSDB
Motif
Pfam: PseudoU_synth_2
Other DBs
NCBI-ProteinID: AIW89106
Position
complement(914366..915106)
AA seq 246 aa
MKKAPFTLIYADDDMIAVNKAAGLLVAADRWDIEAPRLDLLIQKELPQIAPLCQKLYAVH
RIDKDTSGILLYALNAEAHRALNTAFQEREIKKTYRLLIHGRVSEEQFTVDLPLRADGDA
LHRTVVDKRRGKEAITHFTVLETFWQFSLLEARPVTGRTHQIRVHLAAAGYPIVCDSLYG
SGKPVLLSELKQRWHGDVYTEQPLIRRLALHAYQLEGVHPRTSEPFSFTAEYAKDFKSTV
HQLQKL
NT seq 741 nt   +upstreamnt  +downstreamnt
atgaaaaaagctccctttacgctgatttatgccgatgatgatatgattgcggtgaataaa
gccgccggtcttttagttgctgccgaccgttgggatattgaagctccgcggctcgacttg
ctcattcaaaaagagctgccgcagattgcgccgttgtgtcaaaaactctatgccgtacac
cggattgataaagacacttccggcatcttgctctatgccctcaatgcggaagcgcaccgt
gcgttgaataccgcatttcaagagagggagataaagaaaacataccgactgctgattcac
gggcgggtatcggaagaacaatttaccgttgacctgccgctgcgcgccgacggagatgct
ctgcaccgtactgttgtagataaacggcgcggcaaggaagcgataacgcattttacggtg
ctggaaacattctggcaattctccctacttgaggcgcgtcccgttaccggtaggactcat
cagattagggtacaccttgcagccgccggttacccgattgtctgcgattcgctgtacggc
agcggtaagccggtactcctttccgagctcaaacaacggtggcacggtgatgtgtatacg
gagcagccgcttatccggcggcttgcgcttcatgcctatcagcttgaaggggttcatccg
cggacgagcgagcctttctcctttactgccgaatacgctaaggattttaagagtacggtg
catcagctccaaaagctatag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (9)   

Download RDF
DBGET integrated database retrieval system