KEGG   Thermomicrobium roseum: trd_0107Help
Entry
trd_0107          CDS       T00845                                 

Gene name
trpB
Definition
tryptophan synthase subunit beta (EC:4.2.1.20)
Orthology
K01696  
tryptophan synthase beta chain [EC:4.2.1.20]
Organism
tro  Thermomicrobium roseum
Pathway
Glycine, serine and threonine metabolism
Phenylalanine, tyrosine and tryptophan biosynthesis
Metabolic pathways
Biosynthesis of secondary metabolites
Biosynthesis of amino acids
Module
Tryptophan biosynthesis, chorismate => tryptophan
Brite
KEGG Orthology (KO) [BR:tro00001]
 Metabolism
  Overview
   01230 Biosynthesis of amino acids
    trd_0107 (trpB)
  Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    trd_0107 (trpB)
   00400 Phenylalanine, tyrosine and tryptophan biosynthesis
    trd_0107 (trpB)
Enzymes [BR:tro01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.20  tryptophan synthase
     trd_0107 (trpB)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: 
Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
114992..116206
Genome map
AA seq 404 aa AA seqDB search
MTTRTQPVRQLPDERGRFGEFGGMYAPVTLLPAIEELIAAYEDARRDPAFQAEFERLLRD
FVGRPTPLYYAASLTETVGGARIFLKREDLAHTGAHKINNAVGQGLLAKRMGKPRVIAET
GAGQHGVATATVCAMLGLECVVYMGELDVQRQSLNVFRMKLLGAEVRPVSSGSRTLKDAM
NEAIRDWVTNVRTTYYLVGSVAGMHPYPMIVRDFQSVIGKETREQVLAAVGRLPDAVVAC
VGGGSNAIGIFSAFLEDESVELHGAEAAGEGIETGRHAASLTAGRVGVLHGSRSFVLQDE
DGQIVEAHSIAAGLDYPGVGPEHAYLKVTGRAQYHAITDAEALAAFQLLCRTEGIIPALE
SAHAIALAVRLAKERPRDQVIVVNLSGRGDKDMQTVASALGVTL
NT seq 1215 nt NT seq  +upstreamnt  +downstreamnt
atgacgaccagaacccagccagtacgacagcttcccgacgagcgtgggcgctttggggaa
ttcgggggcatgtatgcgccagtgacgctcctgccagcgatcgaggaactgatcgcggcg
tacgaggatgcccgccgtgatcctgctttccaggccgagttcgagcgattgttgcgcgac
ttcgtcggccgccccacgccactctattacgctgcgagtctgaccgagacggtgggaggt
gcccgcatcttcctcaagcgggaagacctcgcgcacaccggcgcacacaagatcaacaac
gcggtcggccagggtctcctggccaagcgcatggggaagccgcgcgtgattgccgagacc
ggtgctgggcagcatggagttgcgaccgcgaccgtctgtgccatgctcggtctcgagtgc
gtcgtgtacatgggcgaactcgacgtgcagcgtcagtcgctcaacgtcttccgcatgaag
ctgctgggggcagaagtccgaccggtcagttcgggaagccgcacgctcaaggacgcgatg
aacgaggcgatccgcgactgggtcaccaacgtgcggaccacctattatctcgtggggtcg
gtcgctgggatgcacccgtacccgatgatcgtgcgcgatttccagtcggtgatcgggaaa
gaaacgcgcgagcaggttttggccgcagtgggacgcttgcctgacgcggtcgttgcctgc
gtcggtggggggtcgaacgcaatcggtatcttttcagccttcctggaagacgagtcggtc
gaactgcacggtgccgaagctgctggagaagggatcgagaccggacggcatgcggccagc
ttgacggctggtcgtgtcggcgtgctgcatggctcgcggtcgttcgtgttgcaggacgag
gatgggcagatcgtcgaagcgcacagtatcgcggctggcctcgactatccgggggtgggg
ccggagcatgcctatctcaaggtgacgggtcgcgcgcagtaccacgcgatcaccgatgcg
gaggctctcgcggcgttccagctgctctgccggacagagggaatcatcccggccttggaa
tcggctcatgcgatcgctctggcggtgcggttggccaaggagcggccgcgcgaccaggtc
atcgtggtcaatctctccggacgaggcgataaggatatgcagacggtcgcgagtgcgctg
ggggtgacactgtga

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