KEGG   Thermomicrobium roseum: trd_1895Help
Entry
trd_1895          CDS       T00845                                 

Gene name
mutM
Definition
formamidopyrimidine-DNA glycosylase (EC:3.2.2.23)
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
tro  Thermomicrobium roseum
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:tro00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    trd_1895 (mutM)
Enzymes [BR:tro01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     trd_1895 (mutM)
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     trd_1895 (mutM)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
complement(1904743..1905612)
Genome map
AA seq 289 aa AA seqDB search
MPELPEVETIRRTLAPVLIGALVIGALRGEHPEDILLDPWPVFARRVRRHRIVALERRGK
YLAARFEDGDRLVIHLGMTGELRLSHPATAPGKHCHLALVLRSLRPLPPSLVDQRQRFLL
RYLDIRRFGRIALLDQAGWETFTARLGPEPLDPTLDPRALWSRLRERRTAIKAALLDQAL
LAGIGNIYADEALFQARLHPARRCQTLSLDEVERLLVALRTVLSAAIENAGTTIRDYRDG
QGRAGSFQSRLQVYGKPAGTPCPRCGTGLARIRIAGRSSVFCPRCQPLH
NT seq 870 nt NT seq  +upstreamnt  +downstreamnt
atgccagagctaccggaagtcgaaaccatccgccgcaccctggcgcccgttctcatcggc
gcgctggtcatcggcgcgctccgcggcgagcaccccgaggatattctgctcgatccttgg
ccagtcttcgcccgccgcgtgcgccggcaccgcatcgtcgcactcgaacggcgcgggaag
tatctcgctgctcgcttcgaggacggtgaccggctcgtgatccatctcggcatgacgggg
gaactccgactcagccaccccgctaccgccccaggcaagcattgtcacctggcgctggtc
ctgcgctcgctgcgacccttgcccccgtcgctcgtcgatcagcggcaacggttcctgctt
cgctatctggacatccggcggttcgggcgcatcgctctcctcgatcaggcagggtgggaa
accttcaccgcgcgactcggccccgagccgctcgatccgaccctcgacccacgcgcgctc
tggtcgcgcctgcgcgagcgtcggacagcgatcaaggcagcactgctcgatcaagcgctc
ctggccggaatcgggaacatctacgcggacgaggccttattccaggcgcgcctccatcca
gcacggcgctgccagacgctctccctggacgaggtcgagcggctgctggtggcgctgcgc
actgtcctgtcggcagcgatcgagaacgccggaaccaccatccgcgattaccgcgacggt
caaggacgagccggctccttccagtcccggctccaggtatacggcaagccggctgggacg
ccatgcccgcgctgcggaaccggactcgcgcggatccggatcgctggccggagcagcgtg
ttctgcccacgctgtcagcccctccactga

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