KEGG   Thermotoga sp. RQ2: TRQ2_1472
Entry
TRQ2_1472         CDS       T00706                                 
Name
(GenBank) protein of unknown function UPF0027
  KO
K14415  tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8]
Organism
trq  Thermotoga sp. RQ2
Brite
KEGG Orthology (KO) [BR:trq00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:trq03016]
    TRQ2_1472
Enzymes [BR:trq01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.8  3'-phosphate/5'-hydroxy nucleic acid ligase
     TRQ2_1472
Transfer RNA biogenesis [BR:trq03016]
 Eukaryotic type
  tRNA spricing factors
   tRNA splicing ligase complex
    TRQ2_1472
 Prokaryotic type
   tRNA splicing ligases
    TRQ2_1472
SSDB
Motif
Pfam: RtcB
Other DBs
NCBI-ProteinID: ACB09816
UniProt: A0A0F6AME4
Position
1480614..1482038
AA seq 474 aa
MKIERLDKYIWKIPKEGDMKVDAIIFTDAESVNDPQFREAMKQLMNVATLPGIVKYALAM
PDIHWGYGFPIGGVAAFDVKEGIISPGGVGFDINCGVRLMKTDLTYEDVKDRMRSLVEAI
YEFVPAGVGSTGDIVLGKKGLRKVLVEGAEWAVKSGYGLEEDLERIEDGGKIHPADPSYV
SEEAFERGSDELGTLGAGNHFVEVQMVQEIYDEELAEFFGLEIGTITVMIHSGSRGFGHQ
VATDYIRLMRDNLKEHNKNLPDKQLINAPFEHPLGQAYYSAMNCAANYAFANREILGHLV
RKAFWKVFGRDTRVDLIYDVAHNIAKVEEYEVDGKRRKLVVHRKGATRSLGPGSEKVPSI
YREVGQPVIIPGDMGTASYLLVGTKKAEEKTFGSTAHGAGRVLGRSAALKKLDYREVLDE
LAEKNIVVMSKSKKTLVEEAPEVYKDVDRVVQIVHEIGISRKVARMIPLGVVKG
NT seq 1425 nt   +upstreamnt  +downstreamnt
atgaagatagaaagactcgataaatacatctggaaaattccaaaagagggagatatgaag
gttgacgcgatcatattcacggacgccgagagtgtgaacgatcctcagttcagagaagcg
atgaaacagctcatgaacgtggccacgcttcccggcattgtgaaatacgccctcgccatg
ccggacatacactggggttacggctttccaataggaggagtcgccgctttcgatgtgaaa
gaaggaatcatttcgccgggtggtgtgggtttcgatataaactgtggagtacgcctgatg
aagacagatctcacctacgaagatgtgaaagatagaatgaggtctcttgtcgaagctata
tacgaattcgttcccgcgggtgttggttcaacgggagacatcgttctcggcaagaagggg
ctcaggaaagttctcgttgaaggtgcggagtgggctgtcaagtcagggtacggtcttgag
gaagatctggaaagaatcgaagacggtggaaagatacatccagcggatccctcgtacgta
tcggaggaagcgttcgagagaggaagtgacgagctcggaactctcggtgcgggaaaccac
ttcgtggaggttcaaatggttcaggaaatatacgacgaagaactcgctgaatttttcggt
ctggagatcggtaccatcacggtgatgattcactccggaagcagaggattcggacatcag
gttgcgaccgactacataaggctcatgagggataatctgaaggaacacaacaaaaatcta
cccgacaaacagcttataaacgctccgttcgaacatccacttggacaggcctattattct
gccatgaattgtgcagcgaactacgcgttcgcgaacagggagatcctcgggcatctcgtt
agaaaagctttctggaaagtgttcgggagagacacacgtgttgatctcatctacgacgtt
gctcacaacatcgcaaaagtggaagagtacgaagttgacggaaaaagaagaaaactggtc
gtccacagaaagggtgccacacgttctcttggtcccggaagcgaaaaggttccttcgatc
tacagagaagtgggacagcccgtcatcataccgggtgacatggggactgcttcctatctt
ctggtaggaacaaagaaagccgaagaaaagaccttcggttccaccgcacacggagcgggg
agagtccttggaaggtccgctgccctgaagaagctggattacagggaagttctcgatgaa
ctggcagaaaaaaatattgtcgtcatgagcaagagtaaaaagactctggttgaagaagct
cctgaagtttacaaagacgtggacagagtggtgcagatcgttcatgagataggtatttcg
agaaaagtagccaggatgattcctcttggtgttgtgaaggggtga

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