KEGG   Takifugu rubripes (torafugu): 101064540
Entry
101064540         CDS       T02386                                 
Name
(RefSeq) nuclear receptor ROR-alpha A-like isoform X3
  KO
K08532  RAR-related orphan receptor alpha
Organism
tru  Takifugu rubripes (torafugu)
Brite
KEGG Orthology (KO) [BR:tru00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:tru03000]
    101064540
  09183 Protein families: signaling and cellular processes
   03310 Nuclear receptors [BR:tru03310]
    101064540
Transcription factors [BR:tru03000]
 Eukaryotic type
  Zinc finger
   Cys4 thyroid hormone receptor-like
    101064540
Nuclear receptors [BR:tru03310]
 1. Thyroid hormone like
  1F. RAR-related orphan receptor
   101064540
SSDB
Motif
Pfam: zf-C4 Hormone_recep Hydin_ADK DUF2956
Other DBs
NCBI-GeneID: 101064540
NCBI-ProteinID: XP_011603928
Ensembl: ENSTRUG00000001436
UniProt: H2RT39
Position
7:14228065..14241999
AA seq 477 aa
MMRAQIEVIPCKICGDKSSGVHYGVITCEGCKGFFRRSQLPTVSYSCSRQSNCQIDRASR
NRCQHCRLQKCLAQGMSRDAVKFGRMSKRQRDSLIAEVERHRQQQQQQQQQEETQSHLSY
PAKTCQDRTMQLLQPGYSFAGDNELMSYATDVHPYLVCSPSESQVSNTVCRGSGVSPVSR
SQGRGDNGAHHDIRGFESRQPAHVLMASYPYNPPENRYNFYPHSLRNMDELCASIVRAHR
ETSQYRVEELQVLRWKLFSREEIQAYQIKSVDEMWQHCALRLTDAVQYVVEFAKHIPGFR
MLTQNDQIALLKTGSMEVVLVRMSRFFNTENNTVFFDGKFARADLFKSLACGDLITAVFD
FAHDMCALKLSEHQLALFSALVLINTDRPCLEDRGKVQRVQRTVELGLRYILQRDNQESL
MHKLYQKMAVLRSLCSLHMEKLRWFSQRYPLTVHSLFPPLYKELFASEADVLPGNTH
NT seq 1434 nt   +upstreamnt  +downstreamnt
atgatgcgagcacaaatcgaggttatcccgtgcaagatctgtggcgataagtcatccggc
gtgcattatggcgtcatcacctgcgaaggctgtaaggggtttttccgacggagccagctg
cccaccgtgtcctactcctgctccagacagagcaactgtcagatcgaccgggccagccgc
aaccgctgccaacactgccgcctgcagaagtgcttggcccaaggcatgagcagagacgct
gtaaagtttgggcggatgtccaagcgccagcgggactctttgatagctgaagtggagagg
caccgtcagcagcagcagcagcagcaacagcaggaggagacgcagtctcacctgtcctac
ccagcaaagacttgtcaagatcgcaccatgcagctacttcaaccgggctactcgttcgca
ggagacaacgagctgatgtcctacgccacggacgtccacccttacctcgtgtgctccccc
agcgagtcgcaggtgtcaaatacggtctgccgaggctccggagtctctccggtatcgaga
tcccaaggaagaggggacaacggtgcacaccatgacataagagggtttgagtccagacag
ccagctcacgtcctcatggccagttacccgtacaaccctccggagaatcgctacaacttc
tatccacactccctgcgaaacatggacgagctgtgcgccagcatcgtgcgcgctcacaga
gagacgagccagtaccgggtggaggagctgcaggttctcaggtggaaactgttcagcaga
gaggagatccaggcctatcagatcaaatcggtggatgagatgtggcagcactgtgccctc
cgactgactgatgctgtgcagtatgtggttgagtttgcaaagcacatcccgggcttccgt
atgctcactcagaatgaccagattgctctcctgaagactggctccatggaggtggttctg
gtcagaatgagccggttcttcaacacagaaaacaacaccgtcttctttgatgggaaattt
gccagagcggacctctttaagtctttagcctgtggtgatttgatcacggcggtgtttgac
tttgctcatgacatgtgcgctctgaagctgagtgaacaccagctggccctcttcagcgct
ctggtgctgatcaacacagatcgaccgtgtttggaggacagaggcaaggtgcagcgagtt
cagagaaccgtggagttgggcctcagatacattcttcaaagagacaaccaagagagtctg
atgcacaagctgtaccagaagatggcagtgttgcgttcactgtgcagcctgcacatggaa
aagctgcgctggttcagtcagcggtatccgctcactgttcactccctcttccctccactc
tacaaggagctgttcgcctccgaggctgacgtgctgccggggaacactcactga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (5)   
   UniProt (1)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (4)   
   Pfam (4)   
All databases (27)   

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