KEGG   Takifugu rubripes (torafugu): 101071218
Entry
101071218         CDS       T02386                                 
Symbol
tent4b
Name
(RefSeq) terminal nucleotidyltransferase 4A
  KO
K03514  non-canonical poly(A) RNA polymerase PAPD5/7 [EC:2.7.7.19]
Organism
tru  Takifugu rubripes (torafugu)
Pathway
tru03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:tru00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    101071218 (tent4b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tru03019]
    101071218 (tent4b)
   03016 Transfer RNA biogenesis [BR:tru03016]
    101071218 (tent4b)
Enzymes [BR:tru01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.19  polynucleotide adenylyltransferase
     101071218 (tent4b)
Messenger RNA biogenesis [BR:tru03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    TRAMP complex
     101071218 (tent4b)
Transfer RNA biogenesis [BR:tru03016]
 Eukaryotic type
  tRNA degradation factors
   TRAMP complex
    101071218 (tent4b)
SSDB
Motif
Pfam: PAP_assoc NTP_transf_2 Polbeta PAP_NTPase TUTase
Other DBs
NCBI-GeneID: 101071218
NCBI-ProteinID: XP_011607984
Ensembl: ENSTRUG00000006962
UniProt: H2SXF3
Position
13:8001358..8020979
AA seq 673 aa
MDPRIAWFQPEQRGPANNLWMQIWETTQGLGYLHVNSSYTTGPHSAPNLKASVNEPSGAL
LTSTNGTLNSVTGGGEDKIPGMTTALGNSGLPEQRDFIPLETSSNHNNRAPGRDTLGGGG
QQQGSGVALVWRGLTDGHPNKRKRDNKASTFGFNSSLLNSGSNTGCCGGYTGTPWKVRNY
SEGVVGLHEEVIDFYSYISPRPEEEKMRLEVVDRIKGVIHDLWPSAEVQVFGSFSTGLYL
PTSDIDLVVFGKWETLPLWTLEEALRKRNVADETSIKVLDKATVPIIKLTDSFTEVKVDI
SFNMKSGVKAAQLIKEFKEKYPVLPYLVLVLKQFLLQRDLNEVFTGGIGSYSLFLMAVSF
LQLHYREDVCSPNINIGVLLIEFFELYGRHFNYLKTGIRIKDGGCYVAKDEVQKNLMDGY
RPSMLYIEDPLQPDNDVGRSSYGAMQVKQAFDYAYVVLSHAVSPIAKYYPNIDTESILGR
IIRVTQEVDEYREWIRKNWASPSQHELAVNRNDVSLSQQLDQCNNNVPDGDAVVLPSAPR
SKTSSNSSSPSPSLRSSPSSSPLSPSTSSSSSDADSDGTPCKTAKQQAGRGASTHREKSA
TVSNHRTQSHTPNSTSGNNKGGKARTSRSHQKSGNHGQQSSSSSKTHQNKPHHQGNNKKR
KNVRDSTQEDLCR
NT seq 2022 nt   +upstreamnt  +downstreamnt
atggatccgagaatcgcctggtttcaaccagaacagcgtggacctgcgaacaacctgtgg
atgcagatttgggagacgacacaagggctcgggtatttacatgtaaatagcagctacacc
actggacctcatagcgcaccaaacctgaaagcgagcgtcaacgaaccctcaggagccctt
ctcaccagcacaaacgggacacttaactcagtcaccggcggcggggaagacaagattccg
gggatgacgaccgcactgggcaacagtggattgccagagcagcgggactttataccactg
gaaaccagtagcaaccacaataaccgagctcctggaagggacaccctggggggagggggg
caacaacagggcagcggggtcgctctggtttggagggggctgacggacggacaccccaac
aaaaggaaaagagacaacaaagcgagcactttcggattcaattccagcctcttgaacagt
ggcagcaacacaggatgttgtggaggttacacgggcacgccatggaaagtcaggaactac
tcggaaggagttgtaggcttgcacgaggaggtcatagatttctacagctacatctcccca
cgaccagaggaggagaaaatgaggctggaggtggtcgacagaatcaagggggtcatccat
gacctgtggcccagtgctgaggttcaagtgtttggaagcttcagcactggtctttatctg
ccaacaagtgacattgatttggtggtttttggaaagtgggagacgctcccactttggaca
ctggaagaagctctccggaaaagaaatgtcgctgatgagacctctattaaagttctggat
aaggctacggttcccatcatcaaactgactgactccttcacagaagtcaaagtggacatc
agctttaatatgaagagtggtgttaaagctgcccagctgatcaaagaattcaaagagaaa
taccctgtattgccttacctggtcttggtgctaaaacaattcctgctgcagagagacctc
aatgaggtttttactggtggaatagggtcctacagtctcttcctcatggctgtcagcttc
ctgcagctccactacagagaagatgtgtgcagtcctaacatcaacattggcgttctgctt
atcgaattctttgagctgtacggccgccacttcaactacctgaaaacaggcatccggata
aaagatgggggttgttatgttgcaaaagatgaggtccagaaaaacttgatggatggctac
aggccctcaatgctctacatcgaggacccgctccagccagataatgatgttggccggagt
tcatatggtgccatgcaggtgaagcaagcctttgactatgcctatgtggtgctcagccat
gctgtgtctcccattgccaagtactaccctaatattgacactgagagcatacttggccgg
ataataagagtaacgcaggaagtggatgaatacagggaatggatccggaagaactgggcg
agtccgtctcagcatgagctcgcagtgaacagaaacgatgtctcactgtcccagcagctc
gaccagtgcaacaataacgtaccagatggcgacgccgtggttctcccctcagctccccgg
agcaaaacctcgtccaactcttcctcgccgtcgccgtcactgcgctcctctccctcttcc
tctccactgtctccttccacgtcctccagctccagcgatgcggactctgatggcacgcca
tgcaaaacagccaagcagcaggctggtcggggcgccagcacccacagagaaaagtctgcc
actgtcagtaatcacaggactcagagccacactcccaactctacatctggaaacaacaag
gggggaaaggccagaacatctcgatctcatcagaagagtggcaaccatggtcagcagagc
tcctccagcagcaaaactcatcaaaataaaccacaccaccaaggcaacaacaagaaaaga
aaaaatgtgcgagactctacacaagaggatctttgcagatag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (31)   
   KEGG ORTHOLOGY (1)   
   RefGene (26)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (46)   

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