KEGG   Takifugu rubripes (torafugu): 101073678
Entry
101073678         CDS       T02386                                 
Name
(RefSeq) PDZ domain-containing RING finger protein 4-like isoform X1
  KO
K15682  ligand of Numb protein X 3/4 [EC:2.3.2.27]
Organism
tru  Takifugu rubripes (torafugu)
Brite
KEGG Orthology (KO) [BR:tru00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:tru04121]
    101073678
Enzymes [BR:tru01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     101073678
Ubiquitin system [BR:tru04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Ligand of Numb proteins
    101073678
SSDB
Motif
Pfam: PDZ PDZ_6 PDZ_2 Tricorn_PDZ
Other DBs
NCBI-GeneID: 101073678
NCBI-ProteinID: XP_011605790
Position
9:complement(12433621..12491424)
AA seq 914 aa
MEGKLSPAALRALRRDAKLSAHSLSGAFTPSDAPAPTLRADTPSPHAEPDPMPETKPGPG
EGVCQRGCGLSLSGDAEHCCVDALRSVTDALEGRSAGLEHQVRMARLRWNRREQWLLARV
TALQNEAQLAALQYQQRLHQYMVHIGSIAEQVNRYCQDGSRLASGSDETSDGGARAGQQE
QLSSPQVNGKELSKSSHEESAEAFRAVKEPVVVQVIRRTPSGRPHGSPQEIRVVDVCTQT
DITFEHIMALAKLRPSTPPVPDVCPFLLSDSCHSLHTMDQDYYGGTGYLSPVPADGERTE
DFEYEEVELCRVNSQEKLGLTLCYRTDEEEDVAIYVSEISPNSIAARDGRIREGDRILQI
NGQDVQNRQEAVAALSSDECTSIVLLVARPETQLEEAWLDDEHSEFLEQLKMEMLEEQQR
EEMELAALQEAQEYEQRAEEDKPTCSTLPHHKDGILSLRDRIQSSEHNVLAHIQRRLSQC
LRDTQDCPTGSTRLEAEDEGEAEGDRFQQLLELKCQIHNGGEYDLFYSHRSTIECSVAEQ
DGMQHELRMLNEELRSIELECQNIMQAHNLRKNTCPPSGGQSAPATRHGSQRGETTKGKL
TDTNDRLEKSDKDSSSAYNTAESSRSTPLAMDRSPEHSLQRMVSLTNQRNLCTGLAAGRS
LSSSPVPAGGAPLPGKSSSPELSQTPQPEDESSGNLKACVSLNPYFSPSHSSQQRQVNIP
AHARHYQSYMHLIQQRSAVEYAQSQLSLLSVCKEPQRPVNEPKMEWKVKIRSDGTRYITK
RPVRDKILRERALKIKEERSGGMTTDDDAMSEMKMGRYWSKEERKQHLVRAKEQRKRREF
MQRSRLESLRENPQSSSESRKEVSIIELSHRKMMKKRNKKILDNWMTIQELMTHGAKAPE
GAKVHNAFLSVTTV
NT seq 2745 nt   +upstreamnt  +downstreamnt
atggaagggaagctcagccccgccgctctccgtgcgctgcgcagagacgccaaactgtcg
gcgcactcgctctccggtgccttcactccttctgacgctcctgcgccaactctacgcgct
gacaccccgagtcctcacgcagaaccggatccaatgcccgaaacaaagccaggaccgggt
gagggtgtctgccagaggggatgcggactctcgctgtccggggacgcggagcactgctgc
gtggacgcgctgcgctccgtcaccgacgcgctggagggaagaagcgcgggtttggagcac
caagtccggatggcgaggctcaggtggaacaggcgggagcagtggctgctggcccgggtc
acggctctgcagaacgaggcccagctcgctgctctgcagtaccagcagaggctgcaccag
tacatggtccacatcggcagcatagcagagcaggtcaacaggtactgccaggacggatcc
aggttggcctcaggatcggacgagacgtcggacgggggggcacgtgctgggcagcaggag
cagctctcctcacctcaggtgaatgggaaggagctgtccaagtccagccatgaggagagc
gcggaggccttccgggctgtcaaggagcccgtggtggtgcaggtcatcaggcgcaccccc
agcggacgcccccacggttcccctcaggagatccgggtggtggacgtgtgcactcagacg
gacatcaccttcgaacacatcatggcgctggcgaagcttcgaccttcgaccccgccagtg
ccggacgtctgccccttcctgctttctgacagctgccattctcttcacacaatggaccag
gactactacggaggaacgggctacctctcgcctgttcctgctgacggagagaggacggag
gactttgagtacgaggaagtggaattgtgccgagtcaacagccaggagaagctagggcta
acgctgtgctacaggacggacgaagaggaagacgtggcgatctacgtcagcgagatcagc
ccaaacagcatcgcggccagagacgggcgcatccgcgagggggaccggattttacagatt
aacgggcaggatgtccagaacaggcaggaagccgtggcggcgctctccagcgacgagtgt
acgagcatcgtgctgctggtggcgagacccgaaacccagctggaggaggcctggctagac
gacgagcacagcgagttcctggagcagctgaagatggaaatgctggaggagcaacagagg
gaggagatggagttggctgccttacaggaggcgcaagagtacgagcagagagcggaggag
gacaagcccacctgctccaccctccctcaccacaaagatggaatactgagtctgcgagac
agaatccagagctcggagcacaacgtcctcgcgcacatccagagacgtctgtcccagtgc
ctgagggacactcaagactgtcccaccggctccacgcggctggaggccgaggacgagggc
gaggccgaaggcgaccgtttccagcagctcctggagctcaagtgtcagatccacaacggc
ggcgagtacgacctcttctacagccaccgcagcaccatcgagtgcagcgtggccgagcag
gacggcatgcagcacgagctgcggatgctcaacgaggagctgcgcagcatcgagctggag
tgtcagaacatcatgcaggcccacaacctccgtaagaacacgtgccctccctccggcggt
cagtccgcccccgccaccaggcacggcagccagcggggggagaccacaaaggggaagctg
accgacactaatgacaggctggagaagtccgacaaagacagctccagcgcctacaacacc
gccgagagctcccgcagcacccctctggccatggaccgctccccggagcactcgctccag
cggatggttagcctcaccaaccagaggaacctctgcaccggcctcgccgccggccgctcc
ctcagctccagcccggtcccggcgggcggcgctccgcttccgggcaagagcagcagcccg
gaactgagccagactcctcagcccgaggacgaaagcagcgggaacctaaaggcgtgcgtt
tcgctgaacccttacttctccccgtcccacagttcccagcagcggcaggtgaacatccca
gcgcacgcccgccactaccagagctacatgcatctgatccaacagcgctccgccgtggag
tacgctcagagccagctgagcctcctcagcgtctgcaaggagccccagaggcccgtcaac
gagcctaaaatggagtggaaggtcaagatccgcagcgacggcacgcgctacatcaccaag
aggcccgtcagggacaagatcctgagggagcgcgccctgaagatcaaggaggagcggagc
ggcggcatgaccaccgacgacgacgccatgagcgagatgaagatggggaggtactggagc
aaagaggagcgcaagcagcacctggtccgggcgaaggagcagaggaagaggcgagagttc
atgcagcgaagtcggctggagagcctgagggagaacccccagagcagcagcgagagccgc
aaagaggtcagcatcatcgagctgagccacaggaagatgatgaagaagaggaacaagaag
attctggacaactggatgaccatccaggagctgatgactcacggggccaaggcccccgag
ggggccaaggtccacaatgcttttctatcagtcaccactgtataa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (25)   
   KEGG ORTHOLOGY (1)   
   RefGene (21)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (4)   
   Pfam (4)   
All databases (38)   

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