KEGG   Takifugu rubripes (torafugu): 101079413
Entry
101079413         CDS       T02386                                 
Symbol
lamc1
Name
(RefSeq) LOW QUALITY PROTEIN: laminin subunit gamma-1
  KO
K05635  laminin, gamma 1
Organism
tru  Takifugu rubripes (torafugu)
Pathway
tru04510  Focal adhesion
tru04512  ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:tru00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    101079413 (lamc1)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    101079413 (lamc1)
SSDB
Motif
Pfam: Laminin_N Laminin_EGF Laminin_B DUF745 Alanine_zipper
Other DBs
NCBI-GeneID: 101079413
NCBI-ProteinID: XP_029686288
Position
22:complement(15895194..15919063)
AA seq 1597 aa
MSTLIRAAVAWSWLLLLLGVRAAMDECTDDRGNPQRCMPEFVNAAFNVTVVATNTCGSPP
EEYCVQTGATGVTKSCHICDARDLRNHHSAVYLTDYNNQQDTTWWQSQTMLAGIQYPNSI
NLTLHLGKAFDITYVRLKFHTSRPESFAIYKRSSQDGPWVPYQYYSGSCEKTYQKVNRGF
IRTGEDEQQAACTDDFSDISPLTGGNVAFSTLEGRPSAYNFDNSPVLQDWVTATDIRVTL
NRLNTFGDEVFNDPKVLKSYYYYAVSDXAVGGRCKCNGHASECVRNAEGRLVCNCKHNTE
GDDCGVCKAFYNQRPWRRATAESANECLPCDCNGKSGECYFDGELYRATGHGGHCRNCAD
NTDGPNCERCLDNYHGALDGSGCLPCGCSAVGSESLQCDNRGVCTCKPGVTGDKCDRCQP
GFHSLTQAGCRPCACSPSGSTQECDVTTGQCRCKDNVEGFNCDRCKLGYFNLDHQNPLGC
TACFCFQHSSVCESAEGFSVDTITSSFQRDDEHWTAQQRDGSSVSVQWSPSKQEVSLLSE
DYFPLYFLAPDKFLGNQMLSYGQNLSLSFRVDRRDTRLSAEDLVLEGAGMRVAVPLIAQG
NAYPNENMQTYVFRLHDSTDYPWRPTISPADFQKLLHNLTAIKIRGTYSERSAGYLDDVS
LVTARQGSGLPARWVEKCSCPQGYQGQHCERCTPGYRRSRPHLGAFSACEPCSCNGHSDT
CGPDTGACDCQDNTAGLSCERCKDGFYGDASRGTPADCQPCPCPAGATCAVILRSREVVC
TNCPAGTTGKRCELCDDGFFGDPLGQSGPGRTCRACKCSDNFDPNAVGNCDRETGECLKC
IHNTDGFFCDRCKDGFYGNALASSPADKCKPCSCSPLGTVGGQSTCLQVTGQCPCHPNVA
GRDCGACQPGFFNLQSGSGCARCNCDPIGSTNGQCDIITGQCECQPGVTGLRCERCERDF
FGFSSSGCKPCDCDPEGSMLGQCKEDGRCECRPGFVGTRCDMCEENFFYNRSAPGCQQCP
SCYSLVRDKVNQQRQKLHELQTLIDNLSSGQETISDKAFEDRLKEAEKAIMELLEEAQTS
KDVDRALLEHLNTINNTLTTQWNRLQNIRNTVDNTSDQAGRAQTRVQDAKSLIERAQREL
DKARDAVSKVDIKPPSSVGDPNNMTLLAEEARALADRHKMEAEQIEKIAKDANDTSTKAY
HLLLKTLDGESKTSQEIDELNRKYNEAKDVAKNLEKQASKVQAEAEEAGDRALKIFANLT
SLPPFSTDALEAEANKIKKEAADLDKLIDKTEKEYNVLRDDLKAKEQEVRKLLEXGKSEQ
QTADQLLARADAAKALAEEAAKKGQSTFREAESILEDLRDFDKRVNDNKTAAEEAMKKIP
FINATIMAANQKTRQAEAALGNAAADAREAKTKAEEAERIASNVQKASTKTKEEAEKAFQ
DTSALDSEVDDMMDQLGSAEQELAKKAAEADRDMMMASMASDNAKEAEDNARKAKGAVKM
VLNTITALLDQLGNIDRVDLSKLNEIDESLKNAKGKMSDSDLDRKLVELNDMARTQEDMI
NDYDRQIREIHADIANLNDIKNTLPEGCFNTPSLERP
NT seq 4794 nt   +upstreamnt  +downstreamnt
atgtcgacattgatccgggctgcggtggcctggtcctggctgctgctgctgctgggggtc
cgggctgccatggacgaatgtacggacgatcgtggcaacccgcagcgctgcatgccagag
ttcgtcaacgccgccttcaacgtgaccgttgtggccaccaacacctgcggctctccgccg
gaggagtactgcgtccagaccggagccaccggggtcaccaagtcctgccacatctgcgat
gcccgggatctccggaaccaccacagcgccgtgtacctgaccgactacaacaaccagcag
gacaccacctggtggcagagccagaccatgctggcggggatccagtaccccaactccatt
aacctgaccctgcacctcggtaaggccttcgacatcacttacgtccggctgaagtttcac
accagtcgccctgagagctttgccatctacaagaggagcagccaggacggcccctgggtg
ccctaccagtactacagcggctcctgtgagaagacgtaccagaaggtgaaccggggcttc
atccgcacaggtgaggatgagcagcaggccgcctgcactgacgacttcagcgacatctcg
ccgctcaccggtggcaacgtggccttctccacgctggagggccgccccagcgcctacaac
ttcgacaacagccccgtcctccaggactgggtgacggccacggacatcagagtgaccctg
aacaggctcaacacgttcggggacgaggttttcaacgaccccaaggtgctgaagtcctac
tactactacgccgtctccgacnttgctgttgggggaaggtgcaagtgtaacggccacgcc
agcgagtgtgtgaggaacgcagaaggacggctggtgtgtaactgcaaacacaacacggag
ggcgacgactgcggcgtctgcaaagccttctacaaccagcggccgtggcgaagggccacg
gcagagagcgccaacgagtgtctgccctgcgactgtaacggcaagagcggcgagtgttac
tttgatggcgagctgtaccgggccaccggtcacgggggtcactgcaggaactgcgctgac
aacacagacggtcccaactgcgaacgctgccttgacaactaccacggcgccctcgatggg
agcggctgtctgccctgtggctgcagcgctgtgggctcggagtccctgcagtgtgacaac
agaggcgtgtgcacgtgtaagccaggagtgaccggagacaagtgtgaccgctgccagcca
ggcttccacagcctgactcaggccggctgcaggccctgcgcgtgctcgccctcaggcagc
actcaggagtgtgacgtcaccacgggacaatgtcgctgcaaagacaacgtggagggtttc
aactgtgacaggtgtaaactgggctacttcaacctggaccatcagaaccccctgggctgc
accgcctgcttctgcttccagcattcgtccgtgtgtgagagcgcggagggtttcagcgtg
gacaccatcacctcgtccttccagcgagatgatgagcactggactgctcagcagcgtgat
ggttccagtgtctcagtccagtggtcccccagtaaacaggaagtgtcgctcctctccgag
gactactttcccttgtacttccttgctccagacaagttcttggggaaccaaatgctgagc
tatggacagaatctgagtctaagtttccgggtggaccggcgagacacgcggctctcagct
gaggacctggtcctggagggggctggcatgagggtagcggtccccctcattgcccagggc
aacgcctaccccaatgagaacatgcagacatatgtgttcaggctccacgacagcaccgac
tacccctggagaccaaccatcagccccgctgacttccagaagcttctccataatctgact
gccatcaagattcgcggcacctacagtgagagaagtgccggttaccttgacgacgtctcc
ctggtgacggccaggcagggttcgggacttccagcccgctgggtggagaagtgcagctgt
cctcaaggttaccagggtcagcactgcgagcggtgcactcctgggtaccggcgctcgcgg
ccacacctgggcgccttcagcgcctgtgagccctgcagctgtaacggccacagcgacacc
tgtggacccgatacaggagcgtgcgactgtcaggacaacacagctggcctgagttgtgaa
cgctgcaaagacggtttctatggcgacgccagtcgcgggacgccggctgactgtcagccg
tgtccctgcccagctggagcgacctgtgctgtgatcctgaggagcagagaggtggtgtgc
accaactgtccggcaggaaccacgggtaaacgctgtgaactctgtgacgacggcttcttc
ggagaccctctgggtcagagcggaccgggccgaacttgtcgcgcttgcaagtgcagcgat
aattttgacccaaatgcggtcgggaactgtgaccgtgaaaccggagaatgtctgaagtgc
atccacaacacagacggcttcttctgcgaccgctgcaaggacggtttctatggaaacgcc
ctcgccagcagcccggccgacaaatgcaaaccttgctcctgttccccactgggaacagtg
ggaggccagtccacctgtctccaggtcaccggccagtgtccctgtcaccccaacgtcgca
gggcgggactgcggcgcctgtcagcccggcttcttcaatctacagagcgggagtggctgt
gcacggtgtaactgtgaccccatcggctccaccaatggccagtgtgacatcatcacggga
cagtgcgagtgtcagcctggcgtcaccggcctccgctgtgaacgctgcgaacgcgacttc
ttcggattcagctcctctggatgcaaaccttgtgactgtgacccggaaggctccatgttg
ggccagtgtaaagaagatggccgctgcgagtgtcggcctggttttgttggcactcgctgc
gacatgtgtgaggagaacttcttctacaaccggtcggctccgggatgccaacagtgtccg
tcctgctacagcctggtcagagacaaggtgaaccagcagaggcagaagcttcacgagctg
caaaccctcattgacaacctcagctcaggacaggaaacgatcagcgacaaggccttcgag
gaccgcctcaaagaggcagaaaaggccatcatggagctcctggaggaggctcagaccagc
aaagatgtggaccgagctctgttggagcacctgaacaccatcaacaacaccctaaccacc
cagtggaaccgcctacagaacatccgaaacactgtggacaacaccagcgatcaggccggc
cgagcccagaccagagtccaggacgccaagagcctgatcgagcgagcccagagggagctg
gacaaagccagggatgctgtcagcaaagtggacatcaagcccccgagcagcgtgggagac
cccaataacatgacgctgttggccgaggaagcgcgggcgctagcagacaggcacaagatg
gaagccgagcagattgagaaaattgccaaagatgccaatgacacatcgaccaaagcgtac
cacctgctgctgaagactcttgatggagaatccaagaccagtcaggagattgacgagctc
aacaggaagtacaacgaggccaaagatgtggccaagaacctggagaaacaggccagcaaa
gttcaggccgaggccgaggaagccggagacagagcgctgaagatctttgccaatctgacc
agcctgcctcccttcagcacagacgctctggaggctgaagccaataagatcaagaaggag
gcagcggacctggacaagctgatcgataagaccgagaaggagtacaacgtcttaagagac
gacctgaaagccaaagagcaggaagtccgcaaattattggaanaaggcaaaagtgagcag
cagacggcagatcagcttttggctcgagctgatgctgccaaagctctggcagaggaggcg
gccaagaaaggccagtccaccttcagggaggcggagagcatcctggaggacctgcgagac
tttgacaaacgggtcaatgacaacaagacggctgctgaggaggccatgaagaagattccc
ttcatcaacgccaccatcatggccgccaaccagaagaccaggcaggcggaggcggcgctc
ggcaacgccgccgcagacgcccgagaggccaaaactaaggccgaggaggcggagcgtatt
gccagcaacgttcagaaggcttccaccaagaccaaggaggaggccgagaaggcgttccag
gacacgagcgcgttggacagcgaggtggatgacatgatggaccagctgggctctgctgaa
caggaactggcaaagaaggcggccgaggcggaccgcgatatgatgatggcctccatggca
tctgacaacgccaaggaggccgaggacaacgcccgcaaggctaaaggggccgtcaagatg
gtcctgaacaccatcaccgccctgctggatcagctgggaaacatcgacagagtggatctg
agcaaactcaacgagatcgacgagtccctgaagaacgccaaaggcaagatgtccgacagc
gatctggacaggaagctggtggagctgaacgacatggcacggacacaggaagacatgatc
aatgactacgatcggcagattcgggagatccacgccgacatcgccaacctcaacgacatc
aaaaacactttacccgaaggctgcttcaacacgccgtctctcgagaggccttag

  All links  
Ontology (1)   
   KEGG BRITE (1)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (103)   
   KEGG ORTHOLOGY (1)   
   RefGene (99)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (114)   

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