KEGG   Thermus scotoductus: TSC_c17930Help
Entry
TSC_c17930        CDS       T01414                                 

Gene name
trpB
Definition
tryptophan synthase subunit beta (EC:4.2.1.20)
Orthology
K01696  
tryptophan synthase beta chain [EC:4.2.1.20]
Organism
tsc  Thermus scotoductus
Pathway
Glycine, serine and threonine metabolism
Phenylalanine, tyrosine and tryptophan biosynthesis
Metabolic pathways
Biosynthesis of secondary metabolites
Biosynthesis of amino acids
Module
Tryptophan biosynthesis, chorismate => tryptophan
Brite
KEGG Orthology (KO) [BR:tsc00001]
 Metabolism
  Overview
   01230 Biosynthesis of amino acids
    TSC_c17930 (trpB)
  Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    TSC_c17930 (trpB)
   00400 Phenylalanine, tyrosine and tryptophan biosynthesis
    TSC_c17930 (trpB)
Enzymes [BR:tsc01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.20  tryptophan synthase
     TSC_c17930 (trpB)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: 
Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
complement(1697450..1698667)
Genome map
AA seq 405 aa AA seqDB search
MLRLPDFPLPDPRGRFGPYGGRYVPETLIPALEEVEAAYKEAKKDPAFLAELEYYLKTFA
GRPTPLYHARRLSEYWGGAQVYLKREDLLHTGAHKINNTLGQALLARRMGKKRVIAETGA
GQHGVSVATVAALFGLECVVYMGEEDVRRQALNVFRMKLLGAEVRPVAAGSRTLKDATNE
AIRDWLTHVRTTFYILGSVVGPHPYPMMVREFQSVIGEEVKEQSLKLFGRYPDVLIAAVG
GGSNAIGLFAPFAYLPEKERPRLIGVEAAGEGLSTGRHAASIGAGKRGVLHGSYMYLLYD
HDGQITPAHSVSAGLDYPGVGPEHSYYADQGIAEYAGVTDEEALEGFKLLARLEGIIPAL
ESAHAIAHAAKVVPEMDKDQIVVINLSGRGDKDVTEVMRLLGGEL
NT seq 1218 nt NT seq  +upstreamnt  +downstreamnt
atgttgaggttgccagactttcccctgcccgaccctcgaggacgcttcggtccttacgga
ggaaggtacgttcccgaaaccttgatcccggccctggaggaggtggaggccgcctataag
gaggccaagaaggacccagcattcttggcggagcttgagtactacctcaagacctttgcc
ggtcggcccactcccctgtaccacgccaggaggctttccgagtactggggcggggcccag
gtttacctgaagcgggaggacctcctgcacaccggggcccacaagatcaacaacaccctg
ggccaggccctcctggcccggcgcatgggcaagaagcgggtcatcgccgaaaccggcgcc
gggcagcacggggtttccgtggccacggtggccgctctctttggcctggaatgcgtggtt
tacatgggggaggaggatgtaaggcggcaggccctgaatgtcttccgcatgaagcttctg
ggggcggaggtgcggcccgtggccgcgggaagccgtacccttaaggacgccaccaacgag
gccatccgggactggctcacccatgtgcgcaccaccttctacatcctgggctcggtggtg
ggcccccacccctaccccatgatggtgcgggagttccaaagcgtgatcggggaggaggtg
aaggagcaaagcctcaagctttttggccgctaccccgatgtcctcatcgccgccgtgggg
ggagggtccaacgccatcggcctcttcgctccctttgcctaccttcccgagaaggagcgc
ccccggctcattggggtggaggccgccggggaagggctttccaccggcaggcacgccgcc
agcatcggggcgggaaagcggggggtgcttcacggaagctacatgtacctcctctacgac
cacgatggccagatcaccccggcccactcggtttccgccgggctggactaccccggggtg
ggaccggaacacagctactatgccgaccagggcatcgccgagtacgctggggtgacggat
gaggaggccctcgagggcttcaagctcctcgcccgcctcgaggggatcatccccgccttg
gaatccgcccatgccatcgcccacgccgccaaggtggtcccggagatggacaaggaccag
atcgtggtcatcaacctctcgggccggggggataaggacgtgaccgaggtgatgcgcctt
ctgggaggggagctatga

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