KEGG T02137: Tsac

Thermoanaerobacterium saccharolyticum: Tsac_1306

Entry

Tsac_1306 CDS T02137

Definition

ATP dependent DNA ligase

Orthology

K01971

DNA ligase (ATP) [EC:6.5.1.1]

Organism

tsh Thermoanaerobacterium saccharolyticum

Pathway

tsh03410	Base excision repair
tsh03420	Nucleotide excision repair
tsh03430	Mismatch repair
tsh03450	Non-homologous end-joining

Class

Genetic Information Processing; Replication and repair; Base excision repair [PATH:tsh03410]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:tsh03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:tsh03430]
Genetic Information Processing; Replication and repair; Non-homologous end-joining [PATH:tsh03450]

SSDB

Motif

Pfam:

DNA_ligase_A_M DNA_ligase_A_C mRNA_cap_enzyme

Other DBs

NCBI-GI:

390934411

NCBI-GeneID:

13072132

UniProt:

I3VUX2

Position

complement(1366169..1367092)

AA seq 307 aa
MSMMDEKIPPMLAISGNVFDDPNWVYEIKWDGSRTIAFLSSSTKLQDRRLVNISHQFPEL
MNINKCLKSNEAILDGELIVLKDNKPSYRNIMMRKHQQNKLRIELLSKSNPAIFITWDVI
YVDGKELLNYPLIERREILSKIVSESNLIRISDYIFGHGKTLFAETGKKQLEGVMAKKAD
SKYYLGKRSSLWQKFKHHIVLNAVILGYMIDKTALVLGLYNEEDKLVHIGNVESGISQKE
LSSFLYVANDLKVGSEFYGLAINNVQWIMPFIVCKVKFMEWSENFKMRAPSFLEFALDVK
PTECRFM

NT seq 924 nt +upstreamnt +downstreamnt
ttgtccatgatggatgaaaaaattcctcctatgctggctatatcgggaaatgtatttgac
gatccgaattgggtatatgaaatcaaatgggatggttcaaggacaatagcatttctttca
tcttctacaaagcttcaagacagaagacttgtaaatataagccaccaatttccagaactt
atgaacataaataaatgtctaaaatcaaatgaagccatacttgacggtgaattgatcgtt
ctaaaagacaataaaccaagctatagaaacataatgatgcgaaaacaccaacaaaacaaa
ctaagaatcgaacttttaagtaaatccaatcccgcaatatttataacatgggatgtaata
tatgttgatggaaaagagttattaaactacccactgattgagcgcagagaaattttaagt
aaaatcgtcagtgaaagcaatctaataaggatatctgattacatatttggacacggcaaa
actttatttgcggaaactggcaaaaaacaattggaaggagtaatggctaaaaaagcagac
tcaaaatattatttaggaaaaagaagcagtctgtggcaaaaattcaaacaccacatagtg
ctaaatgctgtaatattaggttatatgatagacaaaactgcgttagtcttgggcctttac
aacgaggaggacaaacttgtgcacattggaaatgtagaatctggaatatcacaaaaagaa
ttatcatcgttcttatatgtcgccaatgatctgaaggtcggatcggaattttacggtctt
gccattaacaacgttcaatggataatgccttttattgtatgtaaggttaaattcatggaa
tggtcagaaaatttcaaaatgagagcaccatctttcttagaatttgccttagatgtgaaa
cctaccgaatgcagattcatgtaa

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (15)   

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