KEGG T01609: Tsp

Trichinella spiralis: Tsp_00966

Entry

Tsp_00966 CDS T01609

Definition

NADH dehydrogenase I, D subunit

Orthology

K06669

structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)

Organism

tsp Trichinella spiralis

Class

SSDB

Motif

Pfam:

Complex1_49kDa SMC_hinge SMC_N

Other DBs

NCBI-GI:

339241679

NCBI-GeneID:

10904692

UniProt:

E5SB39

Position

Unknown

AA seq 1482 aa
MSVSRFCKNISTREMQRVMRILSPVNCEQRRSYAGPVWYPDGKFYKRFNKVYFEAETISD
GFRPSEADLARARMLDDDRRPNLTPDLVERKVENMILNFGPQHPAAHGVLRLMLELDAEI
ILRAVPHIGLLHRATEKLIEYKTYTQALPYFDRLDYVSMMCNEHAFSLAVEKLLAVEVPP
RAKWIRVLFAELTRILNHILGITTHALDVGAMTPLFWLFEEREKLMEFYERSSGARMHAN
YIRPGGVAVDIPLGLLDDIHAWASGFSARLDEVEDVLTESRLWKQRTIDIGVVTAENALN
WGFSGVMLRGSGIKWDIRKTEPYEVYDQIEFDVPIGTKGDCYDRYLVRMEEMRQSLRIID
QCLNRMPAGEVKVDDHKLVPPKRSEMKRDMESLIHHFKFFTEGYSVPPGCTYVPTEAPKG
EFGVYLVSDGSSKPYRCYIRAPGFAHLSMVEPISKYHFIADLVAIIGTLDVVFGECFPAV
VLKTNSNVYKAAIQFVLSDEFSHLRVEQRQSLLHEGTGPRVLQAFVEIVFDNSDYRLPFE
KDEVRLRRLIGPKKDQYFLEGKMIPKQEVQSLLESAGFSKSNPYYIVKQGKINELATAPD
SYRLKLLREVAEARVEKIIEVLKYIEERLKTLEEETQELKEYQKLDRMRRFNENDHFELC
VVYCHKLSKSSAFDQFLYNSTIRNFFRQIRLIRKRKQKSDYASGPQGIAFDLYCKIEDGG
LLDITEFCDFNKTINLGRALEFTIFDHELADIRRKLDLNIQKQLRELERQWSGFEEERLQ
MISEQSERFKEKTKLELAIRDLKEEVEGERSNRRKAENELDRLKAEITEKQASLDQVQPR
FNELIKQEQQVNTELAIAEQRQRELYSKQGWTEQFRSAEERDQWIKKNLAKITRQISDKR
DQESTQELEQQRESIERNKRHQNELKHNRDALQNERQELWRTESGLSQSLQACKEEINHM
DMILRSIVPKAIIYGMDSVKKVIESLRSRHAHSNLVDGYYGMLIENFQTDKRFYTAVEMT
AGNKLFYHIVENDRIGTKILEEINRQRLPGEVNFFPLNRIQCRQHEYPQNQYVLPMINQL
QFEERFLPVMQHCFGKTLICRNMDVATQMARSERMDCITLEGDRVSSRGALTGGFCDVRR
SRLQLQSQRWNLKQQAEELETQLHSQREQLTERQLSSLESTLQQLEAQKESLNRDLGSEM
LSQLTVDEQSSLEELNRRILKLKESAKVLFNERSERLQEISMADRTQSLDSHQSELLIVT
QRITEISRRMGELEHQLEEYYIGKKKLNQQLEMCQNQERDVQAKITEDAKEMEKMANKQS
MLLRKKEDTMKKIRELGSLPSDAFDKYHNLSSKQLFKQLEQCNNELKKYENVNKKALDQF
VSFSEQKEKLLKRKDEVDGNLESIMDMISQLDQKKYDAIQLTFKLVSKYFEEVFHELVPT
GRGHLVMKTMEMNGDNAVDLASIPQVEQFTGVGIKVGNYHKH

NT seq 4449 nt +upstreamnt +downstreamnt
atgagtgtttcacgtttttgcaaaaacatttcaactagagaaatgcaaagagtgatgcgc
atcctatctccggtgaactgtgaacaacgtcggtcatatgctggcccagtgtggtaccct
gatggtaaattctacaaaaggtttaataaagtttattttgaagcggaaactatatccgac
ggttttcgtccttcagaggcggatctagctcgtgctcggatgttggatgatgaccgccga
ccgaacttaacacctgaccttgttgaacgtaaagtggaaaacatgattttgaactttggt
ccgcagcatcccgctgcacacggtgtcctacgtttgatgctagaattggacgcggagatt
atactgagggcggtgcctcacatcggtttgctacatcgtgcaacggaaaagctgatcgag
tacaaaacgtatacgcaagcattgccgtattttgaccgtcttgattatgtttcaatgatg
tgcaatgagcatgcattttctctagccgtggaaaagttgctcgctgttgaagtgcctcca
cgggcaaaatggattcgagtcctttttgcagaactgacgcgtattcttaatcatattctc
ggcattactacgcatgcgttggatgtaggtgcgatgacacctctgttttggctgtttgaa
gagcgtgagaaattaatggaattttatgaacgatctagtggcgcccggatgcatgccaat
tacattcgacccggaggcgtggcagtggatatccctctcggtttgcttgatgatatccat
gcgtgggcaagtggattttccgctcgacttgacgaagtggaggatgttttgaccgaaagt
agattgtggaaacaacgaacgatcgatataggtgtagtgactgcagaaaatgcattgaat
tggggcttcagtggggtgatgttacgcggttcgggcatcaaatgggatatacggaaaact
gagccgtacgaagtctacgatcaaatagaattcgacgtgccgatcggtactaaaggcgac
tgctatgatagatatttagtgaggatggaagagatgagacaaagtttacgaataattgat
cagtgtttgaatcgcatgcctgctggagaagttaaagttgacgatcataagttggttccg
ccaaagcgctccgaaatgaaacgcgacatggaatcgctgattcatcatttcaaatttttt
accgaaggatattcagtgccacctggttgtacatatgtaccaacagaagctcctaaagga
gaatttggtgtttatctggtttcggatgggtcgagtaaaccttatcggtgctatattcga
gctcccggttttgctcatctttctatggtcgagccgatatctaaatatcattttatcgcc
gatttggtggcaattattggaactttagatgtggttttcggtgagtgttttcctgcagtt
gtgttaaaaacaaattccaatgtttataaagcagccattcagttcgtgctttccgacgaa
ttttctcacttacgtgttgaacaacgccagtcacttttacacgaaggcacaggtcctcga
gttttacaagcgtttgttgaaattgtctttgacaattcagattatagacttccctttgaa
aaagatgaagttcgactgcgacgccttatcggtccaaagaaagatcagtattttctcgaa
gggaaaatgataccgaaacaagaagtgcaaagcttgctagaaagtgctggtttttcaaaa
agcaatccatattatatcgtaaaacaaggaaaaattaatgaattggctactgctcctgat
tcatacagactgaaattattaagagaagtggcagaagctagagttgaaaaaattatcgaa
gtactgaaatatatagaagaacgtttgaagacactcgaagaagaaacacaagagctaaag
gagtatcaaaagttagaccgaatgagaagatttaatgaaaatgatcatttcgaattatgt
gtggtgtactgtcataagttaagtaaaagcagtgctttcgaccaatttctttacaattcg
acaattcgaaatttctttcgacaaattcgactaattagaaagcggaagcagaaatcagat
tacgcatcaggccctcaaggaatagcttttgatctttattgcaaaattgaagatggcggt
ttgcttgacattactgaattttgtgacttcaacaaaactatcaatttgggaagagcattg
gaatttacaatttttgatcatgaattggcagatattcgacgaaaattggaccttaatata
cagaagcagttgcgtgaactggaacggcaatggagtggtttcgaagaagaacgactgcag
atgatttctgaacagtctgaacgttttaaagagaagacaaaattggaattagccattaga
gatttgaaagaggaagtggagggcgagcgttctaatcgacgtaaagcggaaaacgagttg
gatcgactgaaggcagaaattacggagaaacaagccagcttggatcaagtgcagccaaga
ttcaatgaattaataaaacaagaacaacaagttaatacagaactggcaattgctgagcaa
cgtcagagagaactgtacagtaaacaaggttggactgaacagtttcgttctgctgaggaa
cgtgatcagtggatcaaaaaaaatcttgcaaaaattactcgtcaaataagcgacaaacga
gatcaggaatctacccaagaattggaacaacaacgagaaagcattgagcgcaacaagcgt
catcagaatgaacttaagcataatcgtgatgccttacaaaacgaaaggcaagaattgtgg
agaactgaatctggtttgtctcagtcacttcaagcatgcaaagaggaaataaatcatatg
gatatgattttgcgatcaatagttccaaaggcaattatttacggtatggacagtgtgaaa
aaggtgattgaatctttacgatcacgtcatgcacattcgaatctcgtcgacggctattat
ggaatgctgattgaaaattttcaaactgacaaacgattttatactgcagttgagatgact
gctggaaacaaattattttatcacattgttgaaaacgatcgaattggtacaaaaattttg
gaagagatcaatcgtcagcggttgcccggtgaagtgaacttttttccactgaatcgaatt
caatgtcggcagcatgaatatccacaaaatcaatacgtgttgccgatgattaaccaactt
caatttgaagaacgatttcttccagtaatgcagcactgttttgggaaaacgttgatttgt
cgcaacatggacgtagcaacacaaatggctcgttctgagcgtatggactgcatcactttg
gaaggtgacagggttagcagccgtggtgctttaactggaggtttttgtgatgtaaggcga
tctcgtttacaacttcagtcgcaacggtggaatttgaaacagcaagctgaggaactcgaa
actcagctgcatagccaacgcgagcagttaactgaacggcaacttagttctttagaaagc
actctacagcagctagaggcgcagaaagaaagtctgaaccgagatttgggttcagagatg
ctttcgcagttgaccgtcgatgagcagtctagcttggaagaattgaaccgtcgcatactg
aagctcaaggaatctgctaaggtgcttttcaacgaacgatctgagaggttacaagaaatc
tccatggctgaccgaacgcaatcgcttgactcgcatcagtcagaattgctgattgtcact
cagcgaataacggaaattagtcgtcgaatgggagaattagaacatcagttggaagaatat
tatataggaaagaaaaagttaaatcagcagttagaaatgtgccagaatcaagagcgtgat
gtgcaggccaaaattaccgaagatgcgaaggagatggaaaagatggcaaacaagcaaagc
atgctactcaggaagaaagaagacacgatgaagaaaattcgagaactcggttcacttcct
tcggacgctttcgacaaatatcataatctttcatccaagcagctgttcaaacagctcgaa
cagtgcaacaacgaattgaaaaaatatgaaaatgttaacaaaaaagcattggatcagttt
gtcagcttttcagagcaaaaggagaagttgctgaagcggaaagatgaagtcgatggaaat
cttgagtcaattatggatatgatcagtcagttggatcagaaaaaatacgacgctatacag
ttgacgtttaagttggtttcgaaatattttgaagaagtctttcacgagctagttcccaca
gggcgaggtcatcttgtcatgaaaacaatggagatgaacggcgacaacgccgtcgatttg
gccagcataccacaagttgaacagtttactggtgtcggaatcaaggtaggcaattatcat
aaacattaa

All links

Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (11)   

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