KEGG   Trichinella spiralis: Tsp_03783Help
Entry
Tsp_03783         CDS       T01609                                 

Definition
ubiquitin carboxyl- hydrolase family protein
Orthology
K11855  
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:3.1.2.15]
Organism
tsp  Trichinella spiralis
Class
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: 
Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
Unknown
AA seq 918 aa AA seqDB search
MSLDQRIKESLLGKSAVQSGIDKKLCNDIQIILNTTLQKSHSFLEQWAQLHFLASLQSML
ENFFFLILVFQFLAQIEENVVLSFVPAKKPFNHQTELYSSKYICLNKSTMLAKSEDCNGT
DSENSPTTSVSLSSHTCDGLPVPQFDLYPLHKLKLTWNAENQSSTGVGLQNLGNTCFMNS
VLQVLTNTPPMANYLTSGEHGRQLCPGTNGFCAICALRSHVKRVFAAAKSNSGSFSPTHI
AQHIRCVMKSHSHGRQEDAHEFLRYFVDAMQNAALFPYRGRNLDIFTQETSIISRIFGGF
HRSQIVCNNCQYVSVIYDPFLDLSLEIKQWNTVEHAMAHYTKMETLSNDDAYNCPRCKRR
VSARKILTIHSAPNVLTIHLKRFDHFGKIDRHIGYSDRMNLRPFMTEKQGPPVNYRLYGV
VIHNGRSTNSGHYYAFVCNPLGQWHLMDDSRVCPVSSESALKASAYVLFYVRVTTPTATV
KPQAKLDIHPVQPPVSATTNIVKNKICLFKPRSVTVENNIKPLQINLKHKVVVTNGSALS
NSKMKRQDAGDSSKVEKVSLLKKSQTHVVKSLVPYEDDNTSDETADPPKCVQGNAISSLE
FDEAEISSSPSMDEKMYSISSTGHSATNTPSKDSNNEFEEREGEDDDVEDDDEIVVIGEE
EEFEGEEEDVDDDEEEEEEESFGTVPGGSHTDSSPDVAPVNKPASFSSSSKSVNRFFDHS
VRKVPFLSDNVQCKEDVNAEKKISSVNGAESSDLCAGNLPSDNDDDDDDRDNDRRDIFSV
KMEEEHSKQHAEKPKRDVSASSSSSRSNSLIKQQRSNSSSSLSDNHADLLKHLKSYTGCA
LGPSVKSWTGEMNSVDRSLADEARKRRLLKEFNEDEEEDEMLLKKKKNKKKLNGMRQHGD
GNPFQQLQDRRNGIIKGE
NT seq 2757 nt NT seq  +upstreamnt  +downstreamnt
atgtcccttgatcagcgtatcaaagaaagccttcttggcaagagtgcggtgcaaagcggt
attgacaagaaactttgtaacgacattcaaataattttaaacacaacactccagaaatcg
cattcctttttggaacaatgggcacagcttcatttcttagctagtttgcagagcatgttg
gaaaattttttctttttgattttggtatttcagtttttagcacagattgaagaaaatgtt
gtgctttcttttgtgcctgcgaaaaaaccttttaaccatcaaacggaattgtactcctca
aaatacatttgtttgaataaaagtacgatgttggcaaaatcagaagactgtaacggaacc
gattcggaaaacagtcctacgacttcagtttctttgtcgtcgcatacctgcgatgggttg
ccagttccacagtttgatttgtatccgttgcacaaattgaagctcacttggaatgcagaa
aatcagtcttctacaggtgtcggtttgcagaatcttggaaacacgtgcttcatgaacagt
gttcttcaagtgttgacaaatacaccgcccatggctaattatttgacttctggcgagcat
ggccgacagttgtgtccgggtactaatggattttgtgctatctgtgctttgcgcagtcat
gtgaagcgtgtttttgcggcagccaaatccaacagtggttcattttctccaactcatatt
gcacagcatattcgatgtgttatgaaatcgcattcacatggtcgtcaagaagatgcgcac
gaatttcttcgctactttgtcgatgccatgcaaaatgcggcgttatttccatatcgtggc
agaaacctggatatttttacccaggaaacatcgataattagtcgcatatttggtggtttt
catcgtagtcagattgtttgcaacaattgtcaatacgtgtcggtaatttatgatccgttt
ttggatttgagtttggaaatcaagcagtggaatactgtcgagcatgccatggcacattat
acaaaaatggaaacgttgtcaaatgatgatgcgtacaattgtccacggtgtaagagacgg
gtatcggcgaggaaaattttgactattcattctgccccaaatgtgctcacgatccatttg
aagcgttttgaccattttggcaagattgaccgtcatattggctactcggatcgtatgaat
ttacgaccatttatgacggaaaagcagggacctcctgttaattacagactttatggagta
gtgattcacaacggccgctcaacgaactcgggtcactattatgcgtttgtttgtaaccct
ctgggacaatggcatttgatggatgattcgcgtgtttgtcccgtatcgagcgagagtgcg
ttgaaagcatccgcttatgtattattctacgtgcgcgtcactacgccgacagccactgtc
aaaccgcaagcgaagcttgacattcatcctgtccagccaccagtatctgcgacgacgaat
atagtcaagaataaaatatgtctattcaaaccgagatcagtaacagtggagaacaatatt
aaaccgttgcaaatcaacttgaagcacaaagttgttgttacaaatggttccgcattgagc
aatagcaagatgaagcggcaagatgctggtgacagcagtaaggtggagaaagtgtcactt
ttgaaaaagagccaaacccatgttgtgaaaagtttggtcccatacgaagatgacaacact
tcagatgaaactgccgatccaccgaaatgtgtccaaggaaatgctatttccagtttggaa
tttgacgaagcggaaatttcatcttcgccaagtatggatgagaagatgtattcaatttcg
tctacagggcattccgcaacaaatactccatctaaagattcaaataacgaatttgaggaa
agagaaggagaagatgatgatgttgaagacgacgacgaaatagtagttataggagaagaa
gaagaattcgaaggcgaagaagaagatgttgacgatgatgaagaagaagaagaagaagaa
agttttgggactgtgccaggaggcagccacacagactcatcaccagatgttgcacctgtt
aataaacctgcttcgttcagttcatcatctaaatctgtgaatcgcttctttgatcacagt
gttcggaaagtcccattcttatctgataacgtccaatgcaaggaggatgttaatgcagaa
aagaaaattagcagtgtgaatggtgctgaatcgtcggatttatgcgctggtaatcttccc
agtgacaatgatgatgatgatgatgatcgcgacaacgatcgcagagatatcttctctgtg
aaaatggaggaagagcattcaaagcaacatgccgaaaaaccaaaacgggatgtatcagca
tcatcatcgtcgagccgaagcaactccctcattaagcaacagcggtcgaacagtagcagt
agccttagcgataatcatgctgatttgctgaaacatttgaaaagttacactggctgcgct
ttgggaccttcagtgaaaagttggactggtgaaatgaattcagtggatcgtagtcttgcc
gatgaagccaggaaacggcgtttgttgaaagagtttaatgaagatgaagaagaggacgaa
atgttattgaaaaagaaaaaaaataagaagaaattgaacggtatgcgtcaacatggcgat
ggcaatccattccaacaactgcaggatagacgtaatggcataataaaaggagaatga

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