KEGG T01609: Tsp

Trichinella spiralis: Tsp_04010

Entry

Tsp_04010 CDS T01609

Definition

putative histone deacetylase 4

Orthology

K11406

histone deacetylase 4/5 [EC:3.5.1.98]

Organism

tsp Trichinella spiralis

Class

SSDB

Motif

Pfam:

Hist_deacetyl

Other DBs

NCBI-GI:

339246377

NCBI-GeneID:

10904265

UniProt:

E5SHU2

Position

Unknown

AA seq 784 aa
MSDDSVLGALYGRREVPSVFELEQRVLALHCSYKQRQSSLVEQFQRSQQELAVRHYAESQ
HLLDEFMKERSCHAPVARHASLPTMSSPIPRANSIEASTSTNGSSPASCASGVQTSGTIS
DRTKEKLKAFIYGKRRRQLSSSDDSRQHFAPYPIPTGDFHQLRKVCSEPELDSRLASLRN
KLPDSVVFNEAASTTPLTSPCCRDFPSLLWNSNGVSSLAFPAPSLPCLPSYVAHATGGDG
YASTSVEPLNGFLRNSALFLSAPSLAGASTAPAALPTLSVPSFIGGPLAGGGLPLAPAEA
LAQAASLYGHAFAPLSRACANPPTVGVSPMEQYQYNVLRQQLRDLVLRRKSLVREETDDE
VAREGNGPSLLPRSLASLGLSDSGDGNTPKTTGIAFDLLMARHDCICSIKGQHIEEGERI
KTIWSHLQSTDLFEKCKKLNGRKAPLEYLRLCHDECYTTFFGVSPTACLKTDPTRLPLRS
FIQLPCGGIGVDADTYFNDGSTQLSARVAVGCTVDLCLAVAAGTLENGFALVRPPGHHAE
PVQAMGFCFFNNIAIAVRVLQQKKPHLKKFAIIDWDVHHGKGTQLIFENDPNVLYLSLHR
YDNGTFFPGTGSLTEVGSGAGAGFTVNIAWSGGSMGDADYLAAFAHVVLPILDQFEPDFV
LVAAGFDAADGHHVTLGGYHLSPAIFAHMTRSLLRYADSRLVLVLEGGYELKVVNECIEE
CLRVLCGQESRALSAEALAASPSESAQTVLRQLINEQRPYWPILDPKAPLSCSFRQLEAM
KTKK

NT seq 2355 nt +upstreamnt +downstreamnt
atgagcgacgatagtgttttgggcgcgttgtacgggcgccgtgaggttccgtcggttttc
gaactcgaacagcgtgttctggcgttgcactgcagctacaagcaacgtcagagcagcctg
gtggagcagttccaacgttctcagcaagagctggccgtgcgccactatgcagaatcccag
catctgctcgacgagttcatgaaagaacgcagctgccacgcccctgtcgcacgccacgcc
agcttgccgacaatgtcttctccaataccccgcgccaacagcatcgaagcgtccacaagt
acgaacggaagtagtccggcatcttgtgccagcggtgtccaaacgtcaggtacgatcagt
gatcggaccaaagaaaagttgaaagctttcatttatggcaaacgaagaagacagttatca
tcgagcgatgatagtcggcaacatttcgcaccatatccaataccgacgggcgattttcac
cagttgcgcaaagtgtgcagcgaaccagagttggatagtcgtttggccagcttgaggaac
aagctgcccgactcggttgtattcaacgaagcggcttccacgacaccgctaacgtcgccc
tgttgtcgggattttccgtcattgttgtggaacagcaatggtgtgtcgtcgttggctttt
ccggcgccgtcgctgccctgcctaccttcgtatgtggcccacgctaccggcggcgacggg
tacgcttccactagtgtggaaccgttgaacggtttcttgcgcaattcggcgcttttcctg
tccgccccgtctttggccggggcgtcgacggccccggccgccctgcccacattgtcggtg
ccgtcgttcatcgggggaccgcttgccggcggcgggttgcctttggcgccggccgaggcg
ctggcccaggcggcatcgttgtacgggcacgcgtttgccccgttgagtcgcgcctgcgcc
aacccgccaacggtgggcgtttccccgatggaacagtaccagtacaacgttctgcggcaa
cagcttcgagatttggtgctcaggaggaagagtctggtgcgcgaggagaccgacgatgag
gtggctcgcgagggaaacggcccgtcgctgttgcctcggtcgttggcttcgcttggactt
tcggacagcggcgatggaaacacgcccaaaactaccggcattgcgtttgatttgctcatg
gctcgtcacgattgtatatgttcaatcaaggggcagcacatcgaagaaggggaacgtata
aaaacaatctggtctcatttgcagtccacggatctctttgaaaagtgcaaaaaattgaac
ggccgcaaagcaccgttggaatatcttcgcctttgccacgacgaatgctatacgacattt
ttcggcgtttctccgacagcatgcttgaaaaccgacccaacccggttgccgttgcgtagc
ttcatacagcttccatgcggcggtatcggtgtcgacgcggacacctacttcaacgacggt
tctacacagctgtcggcacgcgtggccgtcggctgcacggtggatctgtgcttggctgtc
gctgctggcactttggagaacggtttcgcactggttcgaccaccggggcaccatgctgaa
cctgttcaagctatgggtttctgctttttcaacaacattgccatcgctgtacgagttttg
cagcagaaaaagccccacttgaaaaagtttgccatcatcgattgggatgtgcatcacggc
aaaggaacgcagttgatttttgaaaacgatcccaacgtgttgtacttatcgttgcatcgt
tacgacaatggaacgtttttccccggcacaggcagcttgaccgaagtcggctccggtgcc
ggtgccggcttcacggtcaatatagcctggtccggcggttcgatgggcgatgcggattat
ttggctgcctttgcccacgtcgtcttgccaatattggatcaattcgagccagactttgtc
ttggtggccgccggtttcgacgcagccgacggccatcacgtcactttgggtggttatcat
ttgtcaccggcaatatttgcccacatgaccagatctctgctccgctatgccgacagtcgg
ctggtgttagtgttggaaggtggctacgagttgaaagtagtcaacgaatgtattgaagag
tgcctgcgagttttgtgcggtcaagagagtagagctttgtccgccgaagcgttggccgca
tctccatccgaaagcgcacaaactgtattaagacagttgatcaacgaacagcgtccctat
tggccaattttggatccaaaagcgccactgtcctgcagctttcgtcaactcgaagcgatg
aaaacgaaaaaataa

All links

Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (10)   

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