KEGG   Trichinella spiralis: Tsp_04401
Entry
Tsp_04401         CDS       T01609                                 
Name
(RefSeq) serine/threonine-protein phosphatase 2A catalytic subunit beta isoform
  KO
K04382  serine/threonine-protein phosphatase 2A catalytic subunit [EC:3.1.3.16]
Organism
tsp  Trichinella spiralis
Pathway
tsp03015  mRNA surveillance pathway
tsp04136  Autophagy - other
tsp04140  Autophagy - animal
tsp04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:tsp00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    Tsp_04401
 09130 Environmental Information Processing
  09132 Signal transduction
   04350 TGF-beta signaling pathway
    Tsp_04401
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    Tsp_04401
   04136 Autophagy - other
    Tsp_04401
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:tsp01009]
    Tsp_04401
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tsp03019]
    Tsp_04401
   04131 Membrane trafficking [BR:tsp04131]
    Tsp_04401
   03036 Chromosome and associated proteins [BR:tsp03036]
    Tsp_04401
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:tsp04147]
    Tsp_04401
Enzymes [BR:tsp01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.3  Phosphoric-monoester hydrolases
    3.1.3.16  protein-serine/threonine phosphatase
     Tsp_04401
Protein phosphatases and associated proteins [BR:tsp01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-2 (PP2A)
    Catalytic subunits
     Tsp_04401
Messenger RNA biogenesis [BR:tsp03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Protein phosphatase 2A
     Tsp_04401
Membrane trafficking [BR:tsp04131]
 Autophagy
  Other autophagy associated proteins
   Others
    Tsp_04401
Chromosome and associated proteins [BR:tsp03036]
 Eukaryotic type
  Centromeric chromatin formation proteins
   Other centromeric chromatin formation proteins
    PP2A (protein phosphatase 2A)
     Tsp_04401
Exosome [BR:tsp04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   Tsp_04401
SSDB
Motif
Pfam: Metallophos STPPase_N
Other DBs
NCBI-GeneID: 10905474
NCBI-ProteinID: XP_003375214
Position
Unknown
AA seq 311 aa
MADSDKGQYKDLDAQIEKLYRCEQLSENQVKNLCEKAKEILSEESNVQPVKCPVTVCGDV
HGQFHDLMELFEMGGKSPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYKDRITILRGNH
ESRQITQVYGFYDECLRKYGNSNVWKYFTDLFDYFPLTALVDNQIFCLHGGLSPSIDTLD
HVRGIDRLQEVPHEGPMCDLLWSDPDDRGGWGISPRGAGYTFGQDIAETFNHTNGLSLIS
RAHQLVMEGYNWCHDRQVVTIFSAPNYCYRCGNQAAIMELDDLLTHSFLQFDPAPRRGEP
HVTRRTPDYFL
NT seq 936 nt   +upstreamnt  +downstreamnt
atggcagacagtgataaaggtcagtataaagatttggatgctcaaatcgagaagctgtac
agatgtgaacaactgtcagagaaccaagtcaaaaatttatgcgaaaaggcaaaagaaatt
ttaagtgaagagtcaaatgttcagcccgtgaaatgtccggtaactgtttgcggcgacgtg
catggtcagttccacgatctcatggaacttttcgaaatgggtggcaagtcacctgatacg
aattatttgttcatgggtgattacgttgatcgcggttattattcagttgaaacagttaca
ttattagtcgcactcaaggtgcgatacaaggacagaataacaattttgcgtggaaaccac
gaaagtcgacaaatcactcaagtgtacggattttatgacgagtgtttgcggaaatatggt
aattcgaacgtgtggaagtatttcacagacttgtttgattattttccattaactgcactg
gttgataatcagattttctgcttgcatggaggtctatcgccgagtattgatacccttgat
cacgttaggggcattgaccgccttcaagaagttcctcatgaaggtccaatgtgtgatttg
ctgtggtcagatccggatgatcgaggcggttggggaatctctccacgaggcgccggttat
acatttggtcaagatattgcagaaacgttcaatcacaccaacggattatcgttaatttct
cgcgcacatcagttggttatggaaggttacaattggtgtcacgatcgtcaagttgtgact
atcttttcggctccaaattactgttaccgttgtggtaatcaggcggcgatcatggaattg
gatgatttgcttacccactctttcttgcaatttgatccggctcctcgacgtggtgaacct
cacgttactagacgtactcctgattactttttataa

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Ontology (7)   
   KEGG BRITE (7)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (53)   
   KEGG ORTHOLOGY (1)   
   RefGene (49)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (70)   

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