KEGG   Trichinella spiralis: Tsp_05727
Entry
Tsp_05727         CDS       T01609                                 
Name
(RefSeq) D-glucuronyl C5-epimerase
  KO
K01793  heparosan-N-sulfate-glucuronate 5-epimerase [EC:5.1.3.17]
Organism
tsp  Trichinella spiralis
Pathway
tsp00534  Glycosaminoglycan biosynthesis - heparan sulfate / heparin
tsp01100  Metabolic pathways
Module
tsp_M00059  Glycosaminoglycan biosynthesis, heparan sulfate backbone
Brite
KEGG Orthology (KO) [BR:tsp00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
    Tsp_05727
Enzymes [BR:tsp01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.3  Acting on carbohydrates and derivatives
    5.1.3.17  heparosan-N-sulfate-glucuronate 5-epimerase
     Tsp_05727
SSDB
Motif
Pfam: C5-epim_C Glce_b_sandwich
Other DBs
NCBI-GeneID: 10913517
NCBI-ProteinID: XP_003372051
Position
Unknown
AA seq 582 aa
MSLKRLKFVSAVCLTICFALGYKLFLICDRFNNWDVERRKIFYFTPSPVMHLPGVYGESK
VLAMEDDVLPVVCQINGKRTVRCLEDVEHGEVYMPFKSFLQPYFDHSFAKIQQPSFSTYR
ADSVFGQFGTYNVAERFRVRCINSKSGVPMSVQWSQRGYYYPVQIGQYGLEHYSRSIIEP
MPHVQYIAGLSEKRCFVEGQQTITIQNSSELSVLRMFVLSSDRESSFHITVQRSDTKQLY
RIHYIPAAEPIRVINSFDVYFGFGQLPKNRWIRFTRDLGVDLMHGIGYTSKRMKKVKLKA
IKLVILQLAFAGELCVANVSLQTHAHVDHFLDVANWFVENQDRKGGWSVPVKRSMSNGRL
VLKPGWYSAMAQGHAMSVLCRAYLLENKKEYLDSALKAVQLFYINASDGGLINYFYNVFP
WYEEYPTTPGSFVLNGFIYSLIGLRDLAFCSERVNQQVLDIYKIGLNSLKNMLPLYDTGV
GSLYDLRHVSLHGAPNVARWDYHAVHIFQLHWLYIIEGDELFKETANRWIRFSEALLQKS
SARCSYPILSLPMIYCYVDVIFWLWQFSSILTGSNNNYWYSC
NT seq 1749 nt   +upstreamnt  +downstreamnt
atgagtttgaagcgattgaaattcgtgtccgctgtttgcctgacgatttgctttgcactg
ggatacaagctttttctgatctgtgatcgtttcaacaactgggatgtagaacgacggaaa
attttttacttcacgccgtcgccagtgatgcatttgccgggcgtttatggtgaatcgaaa
gttttggccatggaagatgacgttcttccagttgtttgccaaatcaatggaaagcgcaca
gttcgttgtttggaagatgtcgaacatggtgaagtgtatatgccattcaaaagtttccta
cagccgtactttgaccacagttttgcgaaaatacaacaaccgtcatttagtacttaccgt
gccgacagtgtattcggccagttcggcacgtacaatgttgcagaacgttttcgcgtacgc
tgcatcaattcaaaatctggtgtcccaatgtctgttcagtggagccaacgaggctattat
tatccggttcaaattggtcagtatggtttagaacattacagtcgaagcataatcgaaccc
atgcctcacgttcagtacatcgcaggtctcagtgagaagcgatgttttgtagaaggtcag
caaacgatcaccatacaaaacagttcagaacttagtgttctgcgtatgtttgtattgtct
tccgatcgagaaagcagttttcacatcactgtgcaacgttcggatacaaagcagttgtac
agaattcattatattcccgctgcggagccgatcagggtaatcaattcatttgacgtgtat
tttggctttggccagctaccgaaaaatcgttggattcgatttactcgcgatctcggcgtg
gatctgatgcacggtattggatatacttcgaaaagaatgaaaaaagtcaagctgaaagcg
ataaaattggtgatcctacagttggcatttgctggtgaactttgtgtggcgaatgtgtca
cttcaaacgcacgctcatgttgatcactttttggacgtggcaaattggtttgtggaaaat
caagatcggaaaggaggttggtcagttcctgttaaacgatccatgtccaacggacgcttg
gttctgaagccgggctggtattcagcgatggcacaaggtcatgccatgtctgtattatgc
cgagcatatttgctagaaaacaagaaagaatatttggattccgctttgaaagcagtacaa
ttattttacataaatgcgtcagacggtggactgatcaattatttttacaatgtgtttcca
tggtatgaagaatatccaactacgccaggttcgtttgtactgaatggtttcatatattca
ctgataggcttgcgtgatctggcattctgctcagagcgtgtcaatcagcaagtgctggac
atttataaaattggtctgaatagtttgaaaaatatgttgccactttatgatactggtgtt
ggttcactttacgatttaagacacgtctctcttcatggcgcgccaaatgttgcacgatgg
gattatcatgcagtacatattttccagctgcactggttgtatattatagaaggagatgaa
ttgttcaaagaaactgcaaatcgatggattcgatttagcgaagctttacttcaaaaatca
tctgcacgttgctcttatccgattctttcacttccaatgatatactgttatgttgatgtt
atattttggctatggcaattttcgtctattttaactggcagcaataacaactactggtac
agttgttaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (2)   
   KEGG MODULE (1)   
Chemical substance (2)   
   KEGG COMPOUND (2)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (20)   
   KEGG ORTHOLOGY (1)   
   RefGene (16)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (34)   

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