KEGG   Trichinella spiralis: Tsp_06402
Entry
Tsp_06402         CDS       T01609                                 
Name
(RefSeq) nuclear receptor subfamily 4 group A member 1
  KO
K04465  nuclear receptor subfamily 4 group A member 1
Organism
tsp  Trichinella spiralis
Pathway
tsp04010  MAPK signaling pathway
Brite
KEGG Orthology (KO) [BR:tsp00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    Tsp_06402
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:tsp03000]
    Tsp_06402
  09183 Protein families: signaling and cellular processes
   03310 Nuclear receptors [BR:tsp03310]
    Tsp_06402
Transcription factors [BR:tsp03000]
 Eukaryotic type
  Zinc finger
   Cys4 nerve growth factor IB-like
    Tsp_06402
Nuclear receptors [BR:tsp03310]
 4. Nerve growth factor IB like
  4A. Nerve growth factor IB like receptor
   Tsp_06402
SSDB
Motif
Pfam: zf-C4 Hormone_recep
Other DBs
NCBI-GeneID: 10909185
NCBI-ProteinID: XP_003378534
Position
Unknown
AA seq 417 aa
MPSMLGTSETALLSALSETQPLDKDMLYVEQMHRARQFFGATPQISGAGQASTFVEEPTT
MWCDLPGSSYKMFDRPYREQQPASGLTVLPSSCLSSNYVRTEDQYPQLHAAESASSCTQQ
APTYFPIAPNEPSLPSTYGYLTGTTTPQTAGSRMQQRITRAFSSPEIETPQLASMLSAYA
NPDSIDTIAHSSSTFGSSSLAPSGSPSQTNQTCAVCGDHAACQHYGVRTCEGCKGFFKRT
VQKNAKYVCMGSRDCVIDKRRRNRCQYCRFQKCMAVGMVKEVVRMDSLKGRRGRLPSRSK
VADDSSSTSLTSSLVHAHMVHVIAKSSTEAMAPGDFFMNTDESLLSSLNYSLAVVHRWAE
RLPGWSTLSASDQRQLLKAGSMNVMHIRIAYRYNTQFYRSTCYYYLLDLHHNNHNVI
NT seq 1254 nt   +upstreamnt  +downstreamnt
atgccgtcgatgcttggaacgtccgagaccgccctcttgtctgctctttcggagacgcag
ccactcgacaaagatatgctgtacgtggaacagatgcacagggcgaggcagtttttcggc
gcaactcctcaaatttccggtgctggtcaagcgagcacttttgttgaagagccaacgacg
atgtggtgcgacctgccgggaagcagttacaagatgttcgatcgtccatacagggaacag
caaccggctagcggtttaactgtactgccgtcgagctgtttgagttcgaattatgtgcgt
acagaagaccaatatcctcaactgcacgcagctgaatcagccagctcatgtacacaacag
gcgcctacatattttccgattgctcccaacgaaccatcattaccatcaacgtacggctat
ttaactggaaccacgacaccgcagacggcaggaagtcgaatgcaacaaagaattacaagg
gctttttccagtcctgaaattgaaacaccacaattggctagcatgctatccgcttatgct
aatccggacagcatcgacactattgcgcattcttcatctacatttggcagttcttcattg
gcaccttctggttctccttcacaaacaaatcaaacatgtgcagtgtgtggggatcacgct
gcctgtcaacattatggtgttcgcacttgtgaaggatgtaaaggattttttaagagaaca
gtacagaagaatgcaaaatatgtttgcatgggaagtcgagattgcgtcattgataaacgt
cgtcgtaatcgatgccaatattgtcgatttcaaaagtgcatggctgttggcatggtgaaa
gaagttgttcgaatggacagcttgaaaggccgtcgtggtcgactgccatctcgttccaaa
gttgcggatgattcatcatcaacttcactgacatcatcgttggtccatgctcacatggtt
catgtgattgcgaaatcttcaacagaagccatggcgccgggtgattttttcatgaacacc
gacgaaagtttgctttcatcgttaaattattctcttgctgtggtccaccgatgggctgaa
cgcttgccaggctggtcaactctttccgcgtctgatcaaaggcagcttttgaaagctgga
agcatgaatgtgatgcatattcgaattgcatatcggtataacactcaattttaccgttct
acttgttactattatctattagatctacatcataataatcacaatgttatttga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (21)   
   KEGG ORTHOLOGY (1)   
   RefGene (17)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (30)   

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