KEGG   Trichinella spiralis: Tsp_07445
Entry
Tsp_07445         CDS       T01609                                 
Name
(RefSeq) putative cytoplasmic polyadenylation element-binding protein 4
  KO
K02602  cytoplasmic polyadenylation element-binding protein
Organism
tsp  Trichinella spiralis
Brite
KEGG Orthology (KO) [BR:tsp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tsp03019]
    Tsp_07445
Messenger RNA biogenesis [BR:tsp03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    eIF4F and regulatory proteins
     Tsp_07445
   Factors involved in mRNA localization
    Trans-acting binding proteins
     Tsp_07445
   mRNA cycle factors
    P-body specific factors
     Tsp_07445
SSDB
Motif
Pfam: RRM_1 RRM_7 RNA_bind Smg4_UPF3
Other DBs
NCBI-GeneID: 10898653
NCBI-ProteinID: XP_003381763
Position
Unknown
AA seq 235 aa
MEFSSLWKPSQFLDRSIIEAAEKLSVSRKVFVRDLPTEWPESKVHDAFRRFGNLEINWFS
GIVGRPSNECAYLLFEKEEDVKAMLASSRHVGDGYEVKLQDPPGEPRPVILEPWIITEGV
CLEERDVLIDRNHCVMLSNLPLGLTAPMLAKLVDEKYPGVAYLAIQTDEVYNYPTGSARV
FFDNKQSFEKCSQEGSTIFNFIRGPKKIDIRVYKEEFPYFVNFGKTEKGETSQKN
NT seq 708 nt   +upstreamnt  +downstreamnt
atggaattttcatcattgtggaagccatcccaatttttagacagaagtatcattgaagct
gcagaaaagttatccgtttcgcgaaaagtatttgtgcgtgatctgcccacagaatggcca
gaaagtaaagtacatgatgcatttcggagatttggtaatcttgagataaactggttcagt
ggcatagtcggacgtcctagcaatgaatgcgcatacttactttttgaaaaagaagaagat
gtgaaggctatgcttgctagtagccgacacgtaggcgatggctatgaagtaaaactgcaa
gatccaccaggtgaacctcgaccagtaatccttgaaccatggattattactgaaggtgtt
tgtttggaggaaagagatgttttaatagaccgtaatcactgtgttatgctctctaatttg
ccgcttggactgaccgctcccatgcttgctaaattagttgatgagaagtatccaggtgtt
gcatatctagcaatccaaacagatgaagtctacaactatccaaccggatcagctcgtgta
ttttttgataataagcagtcttttgaaaagtgttctcaagaaggtagtacaatattcaat
tttattagaggaccaaaaaagattgacataagagtgtacaaagaagaattcccatacttt
gttaatttcggcaaaactgaaaaaggtgaaacaagccagaaaaactaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (8)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (17)   

Download RDF
DBGET integrated database retrieval system