KEGG   Trichinella spiralis: Tsp_08235
Entry
Tsp_08235         CDS       T01609                                 
Name
(RefSeq) outer membrane protein, OMP85 family
  KO
K07277  outer membrane protein insertion porin family
Organism
tsp  Trichinella spiralis
Pathway
tsp04137  Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:tsp00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04137 Mitophagy - animal
    Tsp_08235
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03029 Mitochondrial biogenesis [BR:tsp03029]
    Tsp_08235
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:tsp02000]
    Tsp_08235
Mitochondrial biogenesis [BR:tsp03029]
 Mitochondrial protein import machinery
  Outer membrane
   TOB/SAM complex
    Tsp_08235
Transporters [BR:tsp02000]
 Other transporters
  Pores ion channels [TC:1]
   Tsp_08235
SSDB
Motif
Pfam: Omp85 ShlB
Other DBs
NCBI-GeneID: 10906799
NCBI-ProteinID: XP_003373644
Position
Unknown
AA seq 428 aa
MKDEIKRRMVFTGKEPNAEKILKEKIILEQVIFDGVWKTKHSALVSLCSHLFSASNLKDL
ANRAVTLKKYMEDISMFEDISIHVTASNKTFNGVNLHAGAGINSINETNSYMQLACRNAF
GSGELLKTSISVCQELKAMFDFDFAKPFLSVLNSGMRFNVYRKVRPLSQCNGISSDVGAS
IELRHRLWKNWIYSLCLINCWRHFKTSSDVFLIREHAGHSVKNSVENSLIYCTLNNMLMP
TSGSFFKLSQELAGGAGDVNFIRHSLDLKANFQLPFNLINANSFSFNHVIANSPRTLLCM
DRIFLGGSQNLRGFVPNCIGCQTNGNCLGGSSSICFVTHLYRRIFGDFLYAHAFAAVGSL
WYAPVNLELSKLVKELSAGRRRSSVGMGLLFKIGSFCRIEINYCFPLEYQIEDRIHRGLQ
VGAGVSFL
NT seq 1287 nt   +upstreamnt  +downstreamnt
atgaaagacgaaataaagcgcagaatggtattcacaggaaaagagccaaatgcggagaaa
attctcaaagaaaaaattatattggaacaagtcatttttgacggtgtttggaagacgaag
cacagtgcccttgtgtcattgtgttcgcatcttttttccgcatccaatttgaaagacctc
gcaaatcgagctgtaacacttaaaaaatatatggaagatatatctatgtttgaagacatt
tctatacatgttactgctagcaataagacattcaacggtgtaaaccttcacgcaggtgct
ggaattaatagtataaatgaaactaatagctatatgcagctggcatgcaggaatgcattt
ggcagcggagaattgttgaaaacttccatatctgtttgtcaagaattgaaggcgatgttc
gattttgactttgccaagccatttttgtcagttttgaacagcggtatgcggtttaatgtt
taccgcaaagtgagacctctgtctcagtgtaatggaatttcgagcgacgttggcgccagt
attgaactgagacatcgtctgtggaagaactggatttatagtttatgtctgattaattgt
tggcgtcatttcaaaacttcgtcggatgtgtttctaattagagaacatgccggacacagt
gtgaagaatagcgttgaaaattctctgatctattgcacgttaaataatatgctaatgccg
acgtcaggcagctttttcaagctgagtcaagaattggccggcggtgcgggggatgtgaat
ttcattcgtcacagtttagatttgaaggctaattttcaactgccattcaatttgatcaac
gcaaacagtttttcattcaatcacgttatagccaattctccaagaacgttgctttgcatg
gataggatatttcttggcggttcgcagaatttgaggggattcgtaccaaattgtattgga
tgtcaaaccaacggcaactgtttaggagggtctagtagtatatgctttgttacgcatctt
tatcgacgaattttcggcgactttctatacgcgcatgctttcgctgcggttggcagcctc
tggtatgctcctgttaatttggaattgtcgaaacttgtcaaagaattgagcgccggacgg
cgtcgcagcagtgtcggcatgggtctgttgttcaaaattggcagcttttgtcgaattgaa
atcaactattgtttccctttggaatatcaaattgaagacagaatacatcgtggattgcaa
gttggtgctggtgtatcgtttctgtaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (24)   
   KEGG ORTHOLOGY (1)   
   RefGene (20)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (33)   

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