KEGG   Trichinella spiralis: Tsp_08514
Entry
Tsp_08514         CDS       T01609                                 
Name
(RefSeq) putative IPT/TIG domain protein
  KO
K06820  plexin A
Organism
tsp  Trichinella spiralis
SSDB
Motif
Pfam: Plexin_cytopl TIG TIG_2 TIG_plexin Sema PSI LapA_dom DUF4381 PITH DUF424
Other DBs
NCBI-GeneID: 10904577
NCBI-ProteinID: XP_003375528
Position
Unknown
AA seq 1491 aa
MSNKRVVERLYTGRVYVAGVNRLYQLNSNLLLQSQVETGPARDGTICTDDPACDPRTRLS
DNYNKALAIYHKQTKLIVCSSLYDGHCRLRNLYNISVVDDRVVDQNVVSGDLTASAVLFV
NKGPNDEDVLYVGRTGKHGNSDRLTAVKTLSLNPDQLFNSVYKGVSSESSLVYYTDLEMH
RVDYIYGFGSGNFSYFVTKQPKLPGGRTPYISKLVRLCNRDPHYYSYTEVPLECIDDNNG
GVHYNLVQSAYLGKAGFDLARDLNINTEDDVLYVIFVRGVNEPVRAQMSRQSALCVYSMK
AVEQRFLDNVQLCAQGVSMCGLAHQQRPCISTHYSMSALLCNNEVNHPLDGSLPVHQKPA
FTTDDSRLTAVASTTTHMYTVLFLGTEDGQLKKVVVETATSAYQYDTFRVESGWPILPSI
DFDMSNQFLYVLTNRSLSKVRVHECIRHERCQQCLNARDPYCGWCSLENKCSTQEDCKSS
HWLPYKDSKCTSLTKVVPDKIQITTAKFLELTVQNFPAVSGQLSCVFTIGTKKLITGASG
PIDQAISCPTPQTNLLPPIPRDQHELKALLSIQVDDGPDFAAINFTFYDCSNYRSCHDCV
NSDFGCDWCAESAQCTASAAEQCRGQLLVNGMMSKTTTGRRRGAALFCPHIVAQDQRTIL
VPSGTVTAVTVRAVNLLDFQKEFTCEFSIGNAVHRRPASRLGDLIQCDQMEFSYFDPEPN
VTAGFSVTWAPGKALDNVHNIGVVMYKCERLASNCGLCLHLPASYGCGWCTAGQQQSCTI
NSKCDVGGSGSQRRWLHHRDTCPNPTIVKFWPTAGPVDGGTRLTIEGVNLGRDYSEIENA
VRIKNVVCTPIAELYEPSTRIVCVTGPAKHRKTQSGPVVVKIRDVMDYVAVSDQDFRYVV
AEIGGFTPTSGPQSGGTVLTIRGNHLNAGSRITATVGGVPCHVLSLEPRRALCRTGASSL
AGRTGGVEMRFDNAVATYASQQFTFEEDPAVLVVSPQRSIVSGGVEVDVRGERFHLVQRM
TMHFTLQDRQTSRSECTILTADQALCRTPALGPLIDQHLYPQPDRPLLVDYGFSMDGVDS
ANNLSSKSGFRPFSVYPDPEFELFQSSTGGTTGTTLPVKYFKNDYLTINGNNIDLAVNER
DVRIYVGAELCNLTALASRAVTCKPPDKQPPSALGQQQQQQQFHRPASTVVGNQQLSSLE
THLGSTSSTSTSMLANQRAAVVATLPEVVVSVGGRNYTIGYLSYDDPSSSETALFGSWPA
KTVATVAAVLALFVGVVLVLLLLYRRKSTKQRRQMRSLKEQIDAIELKVANECKEAFAEL
QTDIATEWTADTTTKAGIPFLPYKDYVLQVLFPNSTGQASSFLRLEPDLAPRSDRRSRGA
VEKGLLQFNQLLMNKTFLLTLVRVLESNKYFLSKDRVYVGSLLMVILHERMDYCTDILKT
LLAALIERTVRSRHQPKILFRRSESVAERMLAAWFTFLMHKYLLDCAGQPL
NT seq 4472 nt   +upstreamnt  +downstreamnt
atgtcaaataaaagagtcgtcgaacggttgtacacgggtcgcgtatatgtcgccggtgtc
aatcgactttaccagttgaattccaatttactcttgcaaagccaagtggaaacaggccct
gcccgagatggtacaatttgcacggacgatccggcctgcgatccgcgcaccagactctct
gacaattacaacaaagctttggcaatataccacaagcagaccaagctgatcgtctgcagt
tcgctgtacgatggccattgtcgactgcgcaatttgtacaatatatccgtggtcgacgat
cgtgtggtcgatcagaatgtggtcagcggagatttgaccgcgtcggctgttctgttcgtc
aacaagggtccaaatgatgaggatgttttgtacgttggacgaactggcaagcatggcaac
agtgatcgtctgaccgcggtcaaaacgctcagcctcaacccggatcaacttttcaactct
gtctacaaaggcgtcagcagcgaatccagcctggtctattacaccgatttagagatgcac
agagtggattatatttatggattcggttcgggcaatttcagctatttcgtcacgaaacaa
ccgaaactgcccggcggcagaacaccgtacatatcgaaattggttcgcctgtgcaaccgc
gatccgcactattattcttacaccgaagtgccgttggaatgtatcgacgacaacaacggc
ggcgtccattacaatttggtccagtcggcttatttgggcaaagcgggctttgatttggcg
cgcgatttgaacatcaacaccgaagacgacgtcctctatgtgatttttgtacgtggcgtc
aacgagccggtcagggcccagatgtccagacagtcggctttgtgcgtctattcgatgaaa
gcggtcgaacagcgctttttggacaacgtgcaactctgtgcccagggtgtgtcgatgtgc
ggtttggcccaccaacagcgaccctgcatatctacacactacagcatgtcggcgttgttg
tgcaataatgaagtcaatcatccgttggatggttcgttgccggtccatcaaaagccggca
tttaccactgacgacagtcgattgacggccgttgccagcactactacgcacatgtatacg
gttctgtttctcggtaccgaagatggtcaattgaaaaaggtagttgtcgaaacggccaca
tccgcttatcaatacgacacgttccgggtggaaagtggttggccaattttgccaagcatc
gatttcgacatgtccaatcaatttttgtacgttttgacaaatcgatcgttgagcaaagta
cgcgtgcacgagtgcattcgtcacgaacgatgtcaacaatgcttgaacgccagagatccc
tactgtggctggtgttcgttggaaaataaatgcagcacacaagaagattgcaaatcgtcc
cactggttgccgtacaaagattccaagtgcacttcgttgaccaaagtggttccggataaa
attcaaattaccactgccaaatttctcgagcttactgttcaaaattttcctgccgtcagt
ggtcagctgtcgtgcgtgtttacgattggcacgaaaaaattaataactggagcttcaggt
ccaattgatcaagcaatctcttgcccaactccgcagactaatctacttccgccaattccc
cgtgatcaacatgaattgaaagctttgttgagtatccaagtggacgacgggccggatttc
gctgccatcaatttcactttttacgactgttccaactaccgcagctgtcacgactgtgtc
aattcggactttggctgcgattggtgcgccgaaagtgcccagtgcacggccagcgcggct
gaacaatgtcgtggtcagctgttggtcaacggcatgatgtcgaaaacgacaactggtcga
cgacgtggcgccgcccttttttgtccgcacatcgtggcccaagatcagcggacaatattg
gttccgtcgggtacggtcactgcggtcaccgtccgggcggtcaatctgctcgactttcag
aaagaattcacctgcgaattcagcatcggcaacgccgtacaccgaagaccggccagtcga
ctgggcgatctgattcaatgcgaccagatggaattttcctacttcgaccccgagccgaac
gtcaccgccggtttttcggtcacctgggccccgggcaaagcgttggacaatgtccacaac
atcggcgtggtgatgtacaagtgcgaacggctggcgtcgaactgcggcctctgtttgcac
ttgcccgcgtcgtacggttgcggctggtgtaccgccggccagcagcagagctgcacgatc
aattcgaaatgcgacgtcggcggttccggctcccagcggcgttggctccaccaccgggac
acgtgccccaatccgacgattgtgaaattttggcccacggccggtccggtcgacggcggc
acccggctcacgattgaaggagtcaatttggggcgtgactattcggaaattgaaaacgcc
gtccggatcaaaaatgtcgtctgcacgcccatcgccgaactgtacgagccgagcacgcgc
atcgtctgcgtcaccggtccggccaagcaccgcaaaacccagagcggtccggtggtggtc
aagattcgggacgtgatggactacgtcgcggtttcggaccaagatttccgctacgtggtg
gccgagatcggcggcttcacgccgaccagcggtccccagtccggcggcacggtgctcacc
atccgcggcaatcacttgaacgccggcagtcggatcaccgccacggtcggcggtgtgcct
tgtcacgtgctcagcttggaaccgcgtcgggcgctttgccgcaccggcgccagttccctc
gccggtcgcaccggcggcgtggagatgcgcttcgacaacgcggtcgccacctacgccagc
cagcagttcactttcgaagaggatccggccgtgttggtggtgtcgccccagcgtagcatc
gtgtccggcggcgtggaggtcgacgtgcgcggcgagcggttccacttggtccagcgaatg
accatgcacttcacgctccaagaccgccaaacatcccgttcggagtgtacgattttgacc
gccgaccaggctctgtgtcgcacgccggctctgggcccgttgatcgaccaacacctctac
ccgcaaccggaccgtccgctgctggtcgactacggcttcagcatggacggcgtcgactcg
gccaacaacctcagctccaaaagtggcttcaggccgttcagcgtctacccggacccggag
ttcgagttgttccagtcgagcaccggcggcactaccggcaccaccctaccggtcaagtat
ttcaaaaacgactacttgaccatcaacggcaacaacatcgacctggccgtcaacgagaga
gacgttcgcatctacgtcggcgccgaactttgcaacttgaccgctctggccagccgggcg
gtcacttgcaagccaccggacaagcagccgccgtccgcactggggcaacagcagcagcag
cagcaatttcaccgtccggcgtcaactgttgtcggcaaccagcagttgtcgtccctcgaa
acccatcttggcagcacgtcgtccacatcgacgtcgatgctggccaaccaacgcgcggcg
gttgtggcaacgttgcccgaagttgtggtcagcgtcgggggcagaaattacacgatcggc
tatttgagctacgacgatccgtcgtcgtctgagacggcgctgttcggctcgtggccggcg
aagaccgtggccacagtggcggccgtgttggccctgttcgtcggtgtggtgttggtgttg
ttgctgctctacaggcgcaagtcgaccaaacagcggcgccagatgaggtcgttgaaagag
cagatcgacgccatcgaattgaaagtcgccaacgagtgcaaagaggcgttcgccgagctg
cagaccgacatcgccaccgagtggaccgccgacaccaccaccaaagccggcataccgttc
ctgccctacaaggactacgtgctccaggtgttgtttcccaactcgaccggccaggcgtcg
tcgttcctccgactcgagcccgacctagcccctcggtcggaccgtcggtccaggggcgca
gtcgaaaaggggctgcttcaattcaaccaactgctcatgaacaagacgttcctgttgacg
ctggtgcgcgtgctcgaatcgaacaaatactttttgagcaaagaccgagtctacgtgggc
agtctgctgatggtcattttgcacgaacggatggactattgtacggacatattgaaaact
ttgctggcagcgttgatcgaacggaccgttcgcagccggcaccagccgaaaattctgttc
cgccggtccgagtcggtcgccgaacggatgctggccgcctggttcacttttctcatgcac
aaatatttgctcgactgcgccggccagccgct

  All links  
Genome (1)   
   KEGG GENOME (1)   
Gene (51)   
   KEGG ORTHOLOGY (1)   
   RefGene (47)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (10)   
   Pfam (10)   
All databases (64)   

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