KEGG   Trichinella spiralis: Tsp_10072
Entry
Tsp_10072         CDS       T01609                                 
Name
(RefSeq) vesicle-associated membrane protein 3
  KO
K13505  vesicle-associated membrane protein 3
Organism
tsp  Trichinella spiralis
Pathway
tsp04130  SNARE interactions in vesicular transport
tsp04145  Phagosome
Brite
KEGG Orthology (KO) [BR:tsp00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04130 SNARE interactions in vesicular transport
    Tsp_10072
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    Tsp_10072
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:tsp04131]
    Tsp_10072
Membrane trafficking [BR:tsp04131]
 SNARE
  VAMP, Ykt6, Sec22 (R)
   VAMP
    Tsp_10072
SSDB
Motif
Pfam: Synaptobrevin ATG16
Other DBs
NCBI-GeneID: 10905572
NCBI-ProteinID: XP_003373227
Position
Unknown
AA seq 183 aa
MAVFVYLGKLQYERFAEQLSQPNFGVTDGQAVAQGRPQSKRLQQTQAQVDEVVGIMKVNV
EKVLERDAKLSQLDDRADALQEGASQFEKSAATLKHDNYHLRHCADHNYHHCRVGYEINY
TRLLSVCDFVILKIVSVVYRVVSCPLFSCISPCVSGFRRRIKQKKKTFKVDFQLINGVPV
TRL
NT seq 552 nt   +upstreamnt  +downstreamnt
atggctgtttttgtttatttaggtaaactacagtatgaacgattcgctgagcaattgtct
caaccgaattttggcgtgacggatggtcaagctgtggcacagggtcgtccgcagagtaaa
cgcttgcaacaaactcaggcgcaagtggacgaggtggttggcatcatgaaagtgaacgtg
gagaaagttttggaacgagacgccaagttgtcccagttggacgatcgtgccgatgcgttg
caagagggtgcttcgcagtttgaaaaaagtgcagcgacgcttaagcatgataattatcat
ttgcgccattgtgctgatcataattatcatcattgtcgtgtgggctacgaaataaattac
acacggctgttgtccgtgtgtgattttgtaatattgaaaattgtgtctgtagtgtataga
gttgttagttgtccgttgttcagttgcatttcaccctgcgtatctgggtttcgacgtcga
attaaacagaaaaaaaaaacatttaaagtagattttcaattgatcaatggcgttccggta
actcgtttataa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (18)   
   KEGG ORTHOLOGY (1)   
   RefGene (14)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (27)   

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