KEGG   Thermococcus thioreducens: A3L14_03110
Entry
A3L14_03110       CDS       T05104                                 
Name
(GenBank) Nonsense-mediated mRNA decay NMD3 like protein
  KO
K07562  60S ribosomal export protein NMD3
Organism
ttd  Thermococcus thioreducens
Brite
KEGG Orthology (KO) [BR:ttd00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ttd03009]
    A3L14_03110
Ribosome biogenesis [BR:ttd03009]
 Eukaryotic type
  Pre-60S particles
   Export and cytoplasmic maturation factors
    A3L14_03110
SSDB
Motif
Pfam: NMD3 HTH_32 EFP
Other DBs
NCBI-ProteinID: ASJ11937
UniProt: A0A0Q2QS37
Position
573732..574898
AA seq 388 aa
MSERFCYRCGISESEGGPLIEGLCQVCFRKENPVLLIDGEINTELCQNCGSYKKRGVWVD
PHTYELDELVFEVAENALLEVIGDSLDERVREFGIISPEELEEIEELSAGRAVIAFQPVD
WHIEYFPAIITYEIRVKARLHELQYELHDEVKYVTVYVRQTVCPRCSRFLGGYFEAILQV
RAEDRPLTEEERKVIGKLVEEKVDEIMRKDRMGFIQDTIEKEEGLDFYMGSTSSARKLAQ
AIKEKFGGTISEAYELVGLDRQTSREVYRTSVSIRIPKFQKGDIVADKRGNVYEVERVDG
KGLSLRNLSTRESEHRDWKTVKREGIDTVESEKSEAMVTSITPTEIQLMDMKTYETYELE
KPDMDLREGEIYRIVEVRGRKYLLDRKE
NT seq 1167 nt   +upstreamnt  +downstreamnt
atgagcgagaggttctgttaccggtgtgggataagcgagagtgaggggggcccgctcata
gaggggctctgtcaggtctgcttcaggaaggaaaatcccgttctgctgatcgatggcgag
ataaacacggagctgtgtcagaactgcgggagctataagaagaggggcgtctgggtcgat
ccccatacttatgagcttgatgagctggtatttgaagtcgctgaaaatgcgctccttgag
gtgataggagactctctcgatgaacgggtgagggagtttgggataatttcccccgaagag
cttgaggagattgaggaactctccgctgggagagccgtcatagctttccagcccgttgac
tggcacatcgaatactttccggcgataataacgtacgagatccgcgttaaggccagactg
cacgagctccagtacgagcttcacgacgaggtaaaatacgtcaccgtctacgtccgccag
accgtctgtcctcgctgttctaggttccttggtggttatttcgaggcaatacttcaggtt
cgtgccgaagacaggccgctgacggaggaggagcggaaggttatagggaagctcgtcgag
gagaaggtggacgagataatgaggaaagacagaatggggttcatccaggacaccatcgaa
aaggaggaggggcttgatttctacatgggctcgacttcttcggcaagaaagctcgcccag
gcgataaaggagaaatttgggggaacgataagtgaggcctacgaactcgtcggccttgac
aggcagaccagcagggaggtctaccgcaccagcgtgagcatcaggattccaaagtttcag
aagggggacatagtggctgataagcgcggcaacgtctacgaagtcgaacgcgtggacggg
aagggtctctccctcaggaacctctccacccgtgagagcgaacaccgtgactggaagacg
gtgaagcgggagggcatagataccgtggagagcgagaagagcgaggccatggtcacgagt
ataactccgaccgagattcagctcatggacatgaagacctacgagacgtacgagctggag
aagccggacatggatctaagggagggggagatataccgcattgtggaggtcaggggcagg
aagtacctcctggacaggaaggaatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (10)   

Download RDF
DBGET integrated database retrieval system