KEGG   Thioalkalivibrio paradoxus: THITH_12135
Entry
THITH_12135       CDS       T03590                                 
Symbol
rnc
Name
(GenBank) ribonuclease III
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
tti  Thioalkalivibrio paradoxus
Brite
KEGG Orthology (KO) [BR:tti00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tti03019]
    THITH_12135 (rnc)
   03009 Ribosome biogenesis [BR:tti03009]
    THITH_12135 (rnc)
   03036 Chromosome and associated proteins [BR:tti03036]
    THITH_12135 (rnc)
Enzymes [BR:tti01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     THITH_12135 (rnc)
Messenger RNA biogenesis [BR:tti03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     THITH_12135 (rnc)
Ribosome biogenesis [BR:tti03009]
 Eukaryotic type
  90S particles
   RNase
    THITH_12135 (rnc)
 Prokaryotic type
  rRNA processing factors
   THITH_12135 (rnc)
Chromosome and associated proteins [BR:tti03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     THITH_12135 (rnc)
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 dsrm DND1_DSRM Dicer_dimer
Other DBs
NCBI-ProteinID: AHE98880
UniProt: W0DPT6
Position
complement(2614956..2615636)
AA seq 226 aa
MAAGDFRRLLPEALRAGAALEQALTHRSAGSRHNERMEFLGDAVLGLVIADALYERLPDA
PEGDLTRLRAALVNRTALAELARAAGLEGALTLGQGERKSGGQRRESILADTLEALIGAT
YHAAGFEAARAFVLRLYAERLSDLPSAESLKDPKTRLQEWLQGRGEALPEYRVLEISGPD
HRRQFVVEVWLPSQGWGQRGAGSGRRRAEQAAAEAALERLRREARR
NT seq 681 nt   +upstreamnt  +downstreamnt
gtggctgcgggcgatttccggcgcctgcttcccgaggcgctgcgcgcgggcgcggcgctg
gaacaggcgttgacccatcgcagcgccggcagccgccacaatgaacgcatggagttcctc
ggcgacgcggtgctgggactggtgatcgccgatgccttgtacgagcgcctgccggatgct
ccggaaggggatctgacgcgtctgcgcgcggcgctggtcaaccggacggcgctcgcggaa
ctcgcccgcgctgccggcctggaaggggcgctgacgctgggacagggggaacgaaagagc
ggtggccagcggcgtgaatccatcctcgccgacacgctcgaggcactgatcggcgccacc
taccatgccgcgggtttcgaggcggctcgggcgttcgtgctgcgtctctatgccgaacgg
ctcagcgacttgccgagcgccgagtcgctgaaggatccgaagacgcgcctgcaggagtgg
ctgcaggggcgtggcgaggccctgcccgagtaccgggtgctggagatctccgggccggat
caccggcgccagttcgtggtcgaggtctggctgccgagccagggttgggggcagcgcggt
gccggctcggggcggcgccgggccgaacaggcggcagcagaagcggcgctggaacggctg
cggcgggaagcgaggcgatga

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (16)   

Download RDF
DBGET integrated database retrieval system