KEGG   Thermus thermophilus HB8: TTHA1806Help
Entry
TTHA1806          CDS       T00220                                 

Definition
formamidopyrimidine-DNA glycosylase
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
ttj  Thermus thermophilus HB8
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:ttj00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    TTHA1806
Enzymes [BR:ttj01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     TTHA1806
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     TTHA1806
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Structure
PDB: 

Jmol
Position
1684475..1685278
Genome map
AA seq 267 aa AA seqDB search
MPELPEVETTRRRLRPLVLGQTLRQVVHRDPARYRNTALAEGRRILEVDRRGKFLLFALE
GGVELVAHLGMTGGFRLEPTPHTRAALVLEGRTLYFHDPRRFGRLFGVRRGDYREIPLLL
RLGPEPLSEAFAFPGFFRGLKESARPLKALLLDQRLAAGVGNIYADEALFRARLSPFRPA
RSLTEEEARRLYRALREVLAEAVELGGSTLSDQSYRQPDGLPGGFQTRHAVYGREGLPCP
ACGRPVERRVVAGRGTHFCPTCQGEGP
NT seq 804 nt NT seq  +upstreamnt  +downstreamnt
gtgcccgagcttcccgaggtggagaccacccgtaggcggctgcgccccctggtcctgggc
cagacccttaggcaggtggtccaccgcgaccccgcccgctaccggaacacggccctggcg
gaggggaggcggatcctggaggtggaccgccgggggaagttcctcctcttcgccctcgag
ggcggggtggagctcgtggcccacctggggatgacgggggggttccggctggagccgacg
ccccacacccgggcggccctggtcctcgagggccggaccctctacttccacgacccccgg
cgcttcgggcgcctctttggggtgcggcgcggggactaccgggagatccccctcctcctc
cgcctcggccccgagcccctctcggaggccttcgcctttcccgggttcttccgagggctg
aaggagagcgcgaggccccttaaggccctcctcctggaccagcgcctcgccgccggggtg
ggcaacatctacgccgacgaggccctcttccgcgcccgcctaagccccttccgccccgcc
cgaagcctcaccgaggaggaggcgcggcgcctctaccgggccctgcgcgaggtgctggcg
gaggccgtggaactcgggggaagcaccctctcggaccaaagctaccgccagcccgacggc
ctccctgggggcttccagacgcgccacgccgtctacggccgggagggcctcccctgcccg
gcctgcgggcgcccggtggagcggcgggtggtggccgggcggggcacccacttctgcccc
acctgccagggggaaggcccctag

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