KEGG T01299: Tthe

Thermoanaerobacterium thermosaccharolyticum DSM 571: Tthe_0704

Entry

Tthe_0704 CDS T01299

Definition

ATP dependent DNA ligase

Orthology

K01971

DNA ligase (ATP) [EC:6.5.1.1]

Organism

ttm Thermoanaerobacterium thermosaccharolyticum DSM 571

Pathway

ttm03410	Base excision repair
ttm03420	Nucleotide excision repair
ttm03430	Mismatch repair
ttm03450	Non-homologous end-joining

Class

Genetic Information Processing; Replication and repair; Base excision repair [PATH:ttm03410]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:ttm03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:ttm03430]
Genetic Information Processing; Replication and repair; Non-homologous end-joining [PATH:ttm03450]

SSDB

Motif

Pfam:

DNA_ligase_A_M DNA_ligase_A_C mRNA_cap_enzyme Phi-29_GP3

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

complement(723491..724414)

AA seq 307 aa
MSMMDEKIPPMLAVSGQVFDDPDWLYEIKWDGSRTLAFLSSTTRLQDRRLVDVSHQFPEL
MKLNKFIRANEAILDGELIVLKDNKPSYRSIMMRKHQQNKLKIDFMSKSYPAIFITWDIL
YVDGKELLNRPLIERKQMLNKFVNECSIMRISDFIFEHGKTLFEETDKKRLEGVMAKKAD
SKYYLGKRSSLWQKFKHHIVLNAVILGYRIDKTALVLGLYNEEDKLIHIGNVESGISQKE
LSSFLDVANDLKVNPEFYGLGINNVQWIMPLIVCKVKFMEWSENFKMRAPSFLEFALDVK
PTECRFM

NT seq 924 nt +upstreamnt +downstreamnt
atgtccatgatggatgaaaaaattccacctatgctggcagtatcaggccaagtatttgat
gacccagattggctgtatgagataaaatgggatggttcaaggactctggcattcctttca
tctacaacgagactgcaggatagaagacttgtggatgtaagtcatcaatttccagaactc
atgaagctaaacaaatttatcagggctaatgaagcaatacttgatggtgaattaatagtc
ttaaaagacaataagccaagttatagaagcataatgatgcgcaaacaccagcaaaacaaa
ctaaaaatagattttatgagcaagtcttatcctgccatatttattacttgggatatactt
tatgttgatggaaaagagcttttgaatcggccgttaattgagcgaaagcaaatgttaaat
aaatttgtaaatgaatgcagcataatgcgaatatcagactttatatttgaacatggtaag
actttatttgaagaaactgataaaaaacgactggaaggtgttatggccaaaaaagcagac
tcaaaatattacttaggaaaaagaagtagtctgtggcaaaaattcaaacaccacatagta
ctaaatgctgtaatattaggttataggatagacaaaactgcgttagttttaggcctttac
aacgaggaagacaaacttatacacattggtaatgtagaatctggaatatcgcaaaaagaa
ttatcatcgtttttagatgtcgccaatgatctgaaggtcaaccctgaattttacggtctt
ggcattaacaacgtccagtggattatgccactaattgtatgtaaagttaaatttatggag
tggtcagagaatttcaaaatgagagcaccatctttcttagaatttgccttagatgtgaaa
cctaccgaatgcagattcatgtaa

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-TTM (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (17)   

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