KEGG   Thermoanaerobacterium thermosaccharolyticum M0795: Thethe_02274
Entry
Thethe_02274      CDS       T02407                                 
Name
(GenBank) helicase, putative, RecD/TraA family
  KO
K03581  exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
Organism
tto  Thermoanaerobacterium thermosaccharolyticum M0795
Pathway
tto03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:tto00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    Thethe_02274
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tto03400]
    Thethe_02274
Enzymes [BR:tto01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     Thethe_02274
DNA repair and recombination proteins [BR:tto03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     Thethe_02274
SSDB
Motif
Pfam: AAA_19 AAA_30 HHH_4 SH3_13 UvrD_C_2 Viral_helicase1 HHH_5 AAA_11 Helicase_RecD PhoH nSTAND3 HHH_2 HHH SLFN-g3_helicase AAA_22 PIF1 UvrD-helicase NTPase_1 DUF5424 UvrD_C MeaB AAA_28 KAP_NTPase AAA_23 RsgA_GTPase AAA ATPase_2 AAA_12 ABC_tran ATPase T2SSE ResIII AAA_29 AAA_14 AAA_16
Other DBs
NCBI-ProteinID: AGB19847
UniProt: L0IPE7
Position
complement(2235922..2238135)
AA seq 737 aa
MVEIVGTVEEIIFKNEQNGYAVLELNSKTDSITVVGYMPFVGIGETLKIEGEWMTHPDYG
EQVKVSKYEMIAPSTLYGMERFLSSGLIRGIGPVMAKKIVSKFGLDSLNIIETHPEKLME
IPGIGEERVKMITESYEKQKGLRDVMVFLQGYGISTTNAIKIYKQYGDDSINLIKQNPYR
LSDEIFGIGFRTADKIAFAMGVDAHSSYRISSGTKYVLMQYAANGHTYVPLDLLSRETAK
LLDVSEEEVNDSLVLLAQSGKAMFETFEDGSHGVYYIPYYTAENNTADKIMNMTLTDVKP
GDIDIKNEISKIEADMGIKLADNQRLAVEESVKNSILVITGGPGTGKTTIINFIIRLFMK
FGKSVALAAPTGRAAKRMTEATGFEAKTIHRLLEYSYTEEEGRGFGKDDKNPLSEDVIII
DEASMIDILLMNALLKAIPLSSRLILVGDVDQLPSVGAGNVLRDIIDSGLVKVIRLNKIY
RQGKESLIVVNAHKINNGEYPILNDRENDFFFINASTQEEILRIILDLNKRRLPEAYGFD
PFSDIQVLSPMRKGLIGMINLNNELQKCLNPPKKGLNERQMKDFTFRVRDKVMQIKNNYK
MKWTKGDEKGEGVFNGDMGIIESIDNDAQELTVLFDDDKRATYDFADIDELSLSYCVTVH
KSQGSEFPAVIMPMSYGPPMLLTRNLLYTAVTRAKKLVVIVGQEKYLKNMIDNNLISKRY
SGLLPKLKKALRFMIEN
NT seq 2214 nt   +upstreamnt  +downstreamnt
atggtggaaatagtaggtacagttgaggagataatatttaaaaacgagcagaatggatat
gctgtattagagcttaattctaaaacagattctattaccgttgtgggctatatgcctttt
gttggaatcggtgagactttaaagattgaaggagaatggatgacgcaccctgattatggg
gaacaggtaaaagtatcaaagtatgaaatgatagcaccatcaacattgtacggcatggag
agattcctttcatcgggacttataagaggcataggacctgttatggcaaagaagattgtc
tcaaaatttggactcgattcacttaatataatagagacacatcctgagaagttaatggaa
ataccgggtataggcgaagaaagagtcaagatgataactgagtcttatgaaaagcaaaaa
ggtttaagagatgtgatggtgtttttgcaggggtacggcatatctaccacaaatgctata
aaaatttacaaacagtatggcgatgattcaataaatcttataaagcaaaacccgtacagg
ctatctgatgagatatttggaattggatttaggaccgccgataaaatcgcttttgcaatg
ggggttgatgcacattcaagctacagaatttcatcagggacgaaatacgttttaatgcag
tacgctgcaaatggacatacatatgtacctcttgacttattatcaagggaaactgctaaa
ctccttgatgtatctgaagaagaagtgaatgattcccttgtgcttttggctcagagcggc
aaggcaatgtttgaaacatttgaagatggatctcacggtgtttattatataccatattat
acggcagaaaacaatacagcagataagataatgaatatgacattgacagatgtgaagcct
ggtgacatcgatataaaaaacgaaatatcgaagatagaagctgatatgggtattaagctt
gcggataatcagaggcttgcagttgaagagtctgtaaaaaattcaatccttgtaataacg
ggaggacccggcacaggaaaaaccacgataataaatttcataataaggctatttatgaaa
tttggaaaatcagttgctcttgctgctccaacgggtagagctgcaaaaagaatgactgag
gctacaggctttgaagcaaagacaatacaccgcctccttgaatattcttacacggaagaa
gagggcagaggatttggtaaagacgataaaaatccattatctgaggatgtcatcataatt
gatgaagcatctatgatagacatattgctgatgaatgctttgcttaaggcgattccctta
agctctagattgatacttgtgggagacgttgatcaactgccatctgtaggagccggcaat
gttttgagggatataatagatagcggtttagttaaggtaataaggcttaataaaatatac
aggcaaggtaaagaaagtctaattgtagtaaatgcgcataagataaacaatggtgaatat
cccatattaaacgatagagaaaatgattttttctttataaatgcttctacacaagaagaa
atattgagaataatactggatcttaataaaagaaggctgccggaggcctacggctttgat
cctttttcagatatacaagttttaagtcccatgagaaaaggcttaatcggcatgataaat
ctcaacaacgagctgcaaaaatgccttaatccacccaaaaaaggattgaatgaaaggcaa
atgaaggattttaccttcagagtcagggacaaagtcatgcagataaagaataattacaag
atgaagtggacaaaaggcgatgaaaaaggcgaaggcgtctttaatggcgatatgggaatc
attgagtctatagataatgatgcacaggaactcaccgttttatttgatgatgataagcgg
gctacttatgattttgcagacattgatgaattaagcctttcctactgtgttactgttcat
aagagccaaggcagtgaatttccggctgtaatcatgccaatgagctatggcccaccaatg
cttttaacaaggaatcttttgtatacggctgtaactagggcaaaaaaacttgttgtcatc
gtgggacaagaaaaatatttaaaaaacatgatagacaataatctcatatcaaagagatac
tccggacttttgccaaagcttaaaaaggcgcttagatttatgatagagaattaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (35)   
   Pfam (35)   
All databases (45)   

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